RNA id: XM_043226916.1


Basic Information

Item Value
RNA id XM_043226916.1
length 2101
RNA type mRNA
GC content 0.43
exon number 2
gene id agtr1b
representative True

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 9224012 ~ 9233947 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGTGGGTGTATGCAGGGGGGTGGTGGTCTTAACAAGCAGATTCTGTTGAAACACATGAGACGTGAGCCATGTTTTCATCAGTGGGGGGTGGacatgctgtgtgtttgtacaagctgatgtgtgtgtaagtgtcaAGCGCTTTGACTGTTTCTCGTCTTGTTTGAGCTGTTCATGCACTTTGGCTCACACTCTGAAACTGTGATTTCTCACCCTCCGCATCAGGTGTCAGTGAGGCCTTTACCCAAAGCTGGTGTTGGTTACTGCAGACACACCCTGTGGATAGCAGAACCCATTTATAGTCACATAATCACTACAACTTAAGACCAGAAATGGAGAACAAAACATCAGGGGTGAGCAAGGGCCTCCATGTGAACTGCAGTATGTCTGGAAGGCACAGCTTCATCTTCACCTTCATCCCCGTCGTCTACGGATGCAATTTCGTCATCGGGATCATTGGCAATAGCATGGTGGTGGCTGTCATCTACCGCTACATGAAGCTGAAGACTGTGGCAAACGTGTTTGTGCTCAACCTAGCCATATCAGACCTCACCTTCCTTATTACGCTACCTTTGTGGGCAACTTTCACCGCTACGGGTTACCATTGGCCGTTTGGGACTTTCCTGTGCAAGGCGAGCGCCGGATTGGTCATCTTCAACCTCTATACTAGCATTTTCTTCCTCACCGCTCTTAGCCTCGATCGATACCTTGCTATCGTACACCCGGTGCGCTCTAGGCGCCAACGCACGCTTTTTTACGCCAACCTCACCTGTGTACTTATATGGCTGTTTGCCTTGCTCCTCAGCGCGCCTACGGCGCTAAGCCGGGACGTGTACGACATTGGGAACTCTACGTTGTGCGCTGTGTGGCACCGCAGCGAGCAGATCAACTTGCTAGTTAGCCTTAGCGTGCTAAAAAGCGTGCTGGGTTTCCTTGTGCCTTTCCTGGTCATCATCACCTGCTATTGCCTCATCGGCCGGGCGCTTCTGGGTTCCAGGGGTCTTTTGAGGAAAAGCGTTCGCTCTCGGGAAGACGAAACTCTTCGTATGATAGCCGCTACTGTgctagctttttttgtttgctgggCTCCTCACCAAGCTTTCCActtcatggagctgctggccaCGCTTGGCGTAGTGGAAAACTGCCAAACATTGGATGTTATTGACACAGCCATGCCATTTACCATCTGCATCTCTTATTTAAACAGTTGCGTAAACCCCATTCTTTATGGTTTTGTTGGACATAACTTTCGCAAGAACTTGCTGAGGTTACTAGGTTGCGGGTCTGGGCAATCTGGCAATAACTTTACGATTAACTCAAAGATGAATGTCACCCCACATTGTAATTCCGGTCTGCTCAACCCAACAAGCACCAAGATGGATTCAACATCCACGGTGAAGACATCTTAAGTATAAAAGGCATAGCTGCAATtgtgtatttatctattttggGATTTTGAATGGTACTGTAGGATATCGTTATCATCTTATTTTATGATTGGCCAACAACATAATTGGCAATTGCACTgctaaataacatttctgttaaaaatgcattactgaaTTGGTAATAATGCAAGTAAAAAACTGTTTATGGCGCTATCTATTAGTGCCAGTTTATGCCAATATCAATATCTATATATTCTTGTCACTCTTTTTCCCTGCTTTAAATAAAGCCACAATgtatataacatattttgaatgcagtgcaACAGTgtgaaatgctaaattatatcTGTGACCTAAGTGACCTAATCAACTCAAACACTTTGTGATCATGTCTCTGTAGTGCAACAGCAATGTCTCAACTTTTTCTAGAAAGTATAGTATGTCATTAACTACTTGTGTATGAGATATGAATGTAAAAACCAAACACACTgaacataaaatgttacatataattttgttttcaacaaatttctaattttacaaagatgttatataataacattaaaaaagtgtttattgtaaatttgccatttaaaaatgcattatttttctatatCTTTTTATGTTCTTTCCAAACTTTGTACTCATCTGAACATTCATACAGCACTAAATGTGTTTAGGACTACTTAAATAAAAGCcagttttttaaacaa

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0019229 regulation of vasoconstriction biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004945 angiotensin type II receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU239537 lncRNA downstream 178105 9045613 ~ 9045907 (-) True G161758
TU239525 lncRNA downstream 189729 9032121 ~ 9034283 (-) False G161751
TU239527 lncRNA downstream 190440 9031218 ~ 9033572 (-) True G161751
TU239509 lncRNA downstream 330645 8893148 ~ 8893367 (-) True G161737
TU239506 lncRNA downstream 336798 8886948 ~ 8887214 (-) True G161734
TU239627 lncRNA upstream 187743 9421690 ~ 9422031 (-) True G161833
TU239633 lncRNA upstream 196343 9430290 ~ 9461957 (-) True G161839
TU239685 lncRNA upstream 613446 9847393 ~ 9847860 (-) True G161878
TU239832 lncRNA upstream 901500 10135447 ~ 10158815 (-) True G161973
TU239843 lncRNA upstream 977204 10211151 ~ 10214096 (-) True G161981
XM_043226915.1 mRNA downstream 194 9218824 ~ 9223818 (-) True cpb1
XM_043226900.1 mRNA downstream 168607 9052785 ~ 9055405 (-) True fzd8a
XM_043226044.1 mRNA downstream 343880 8873506 ~ 8880132 (-) True klf6a
XM_043225790.1 mRNA downstream 554882 8530108 ~ 8669130 (-) True adarb2
XM_043225798.1 mRNA downstream 724690 8495872 ~ 8499322 (-) True idi1
XM_043226554.1 mRNA upstream 109620 9343567 ~ 9346857 (-) True zic1
XM_043227115.1 mRNA upstream 522201 9756148 ~ 9766236 (-) False LOC122330247
XM_043227114.1 mRNA upstream 522201 9756148 ~ 9765515 (-) True LOC122330247
XM_043227113.1 mRNA upstream 522202 9756149 ~ 9766264 (-) False LOC122330247
XM_043226921.1 mRNA upstream 844854 10078801 ~ 10108057 (-) False dipk2ab
TU239150 other downstream 1817329 7390095 ~ 7406683 (-) False pard3aa
TU238971 other downstream 2127173 7090532 ~ 7096839 (-) False ralaa
TU238949 other downstream 2218604 6945186 ~ 7005408 (-) False G161327
TU238957 other downstream 2256413 6945186 ~ 6967599 (-) True G161327
TU238790 other downstream 2753911 6396171 ~ 6470101 (-) True G161224
TU239703 other upstream 697348 9931295 ~ 9932802 (-) True G161893
TU239863 other upstream 1046850 10280797 ~ 10286608 (-) True G161992
TU239881 other upstream 1162137 10396084 ~ 10413468 (-) False myo3a
XR_006247939.1 other upstream 1217612 10451559 ~ 10458476 (-) False zgc:174877
XR_006247941.1 other upstream 1220051 10453998 ~ 10458476 (-) False zgc:174877

Expression Profile