Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU124643 |
| length | 770 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC111193296 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035906.1 |
| NCBI id | CM008309.1 |
| chromosome length | 35377769 |
| location | 22262527 ~ 22270518 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU124641 | lncRNA | upstream | 9378 | 22253019 ~ 22253231 (+) | True | G92683 |
| TU124627 | lncRNA | upstream | 155266 | 22107013 ~ 22107343 (+) | True | G92669 |
| TU124595 | lncRNA | upstream | 170722 | 22091578 ~ 22091887 (+) | True | G92648 |
| TU124594 | lncRNA | upstream | 177067 | 22085210 ~ 22085542 (+) | True | G92647 |
| TU124592 | lncRNA | upstream | 194613 | 22067641 ~ 22067996 (+) | True | G92645 |
| TU124662 | lncRNA | downstream | 83687 | 22353936 ~ 22354317 (+) | True | G92697 |
| TU124673 | lncRNA | downstream | 331492 | 22601741 ~ 22601989 (+) | True | G92708 |
| TU124680 | lncRNA | downstream | 416172 | 22686421 ~ 22686749 (+) | True | G92715 |
| TU124689 | lncRNA | downstream | 543330 | 22813579 ~ 22813782 (+) | True | G92721 |
| TU124704 | lncRNA | downstream | 629448 | 22899697 ~ 22900073 (+) | True | G92735 |
| XM_007254513.3 | mRNA | upstream | 486986 | 21770369 ~ 21775623 (+) | True | tfpt |
| XM_007254516.3 | mRNA | upstream | 495249 | 21747323 ~ 21767360 (+) | True | LOC103046806 |
| XM_022673757.1 | mRNA | upstream | 542438 | 21703591 ~ 21720171 (+) | True | LOC103045162 |
| XM_022673755.1 | mRNA | upstream | 564459 | 21686025 ~ 21698150 (+) | True | LOC103043132 |
| XM_022673765.1 | mRNA | downstream | 385584 | 22655833 ~ 22662537 (+) | False | irx2 |
| XM_007254530.3 | mRNA | downstream | 385585 | 22655834 ~ 22662537 (+) | True | irx2 |
| XM_007254531.3 | mRNA | downstream | 598853 | 22869102 ~ 22874060 (+) | True | LOC103025323 |
| XM_007254532.3 | mRNA | downstream | 707663 | 22977912 ~ 23023100 (+) | True | LOC103025629 |
| XM_007254533.3 | mRNA | downstream | 770689 | 23040938 ~ 23066260 (+) | False | slc6a3 |
| TU124348 | other | upstream | 910606 | 21269165 ~ 21352003 (+) | True | G92462 |
| TU124346 | other | upstream | 910606 | 21275163 ~ 21352003 (+) | False | G92462 |
| TU124347 | other | upstream | 910606 | 21275163 ~ 21352003 (+) | False | G92462 |
| TU124179 | other | upstream | 1317103 | 20941426 ~ 20945506 (+) | True | G92350 |
| TU124129 | other | upstream | 1441219 | 20819150 ~ 20821390 (+) | False | LOC103032252 |
| TU125154 | other | downstream | 2427884 | 24698133 ~ 24708374 (+) | True | G93079 |
| TU125228 | other | downstream | 2644440 | 24914689 ~ 24965444 (+) | True | G93135 |
| TU125312 | other | downstream | 3041628 | 25311877 ~ 25313707 (+) | True | G93185 |
| TU126114 | other | downstream | 4678214 | 26948463 ~ 26948879 (+) | True | G93753 |
| TU126349 | other | downstream | 5649345 | 27919594 ~ 27939020 (+) | False | LOC111193309 |
