RNA id: XM_007236768.3


Basic Information

Item Value
RNA id XM_007236768.3
length 2716
RNA type mRNA
GC content 0.46
exon number 2
gene id LOC103022923
representative True

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 25748629 ~ 25765785 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CTTGTGTTGAAATCAGTAGTCAGATGGTGCATTAGTGGGAGGAAATATGCTGAACGTGCCTGACAGGCACAACTTCCCATTCTAATTCTGCTTCCAGTGAACCTCCTCCCCCTCCTATGCACACCCCTACTGAGCTCTGCAGGGGAGatgaggagagaaaaagaaaaaaagagagagagaaagagagagagagcacgcacTAGAGGGAATAGTTATAAAGTAAGTGAAGATGACAGAAAACACAGCGGAGCAGCtggcgtgagagagagaggccagtGTGTTTATGTTGCTCTTTTGGACTGAAATCCTCACACCAGGGATTTTGGAGGAGGAAGGAGAACTATAACACAGAGCTCACAGACTGTTCCTGTGTGTCCACATCTATGCAAACATCATCATGTTCAGGGCTGTGAACTACCAACCCACAAGACAGAAGTCACAGCTGCCCTCCTGTCCTACAGCATCCTGTCTTTTACATCCTTCTGTCAGAGAACTGCCAATTTCTTAACCTGTCTCATCATTCTCACCTACAGTCTCCTAACTAAGCTTCAGGGCACAGTCCTGATCCTCTGATCCACTCATCTACTGCTCTCAAGaTATGAACTACAGCAATGCTACCCCTCCCTCTGGCTGTGGAAGCCAATCAGCTGGCAACAGGACAGACTTCAGCAGCGCATTCACGCACCAGGTCCTTCCCGTGCTTTACGCTCTCATCTGCGCAAGCGGCCTGGTTTTGAATAGCCTGGCTGCATGGATCTTCTTCCGGGTGCCCAGCACTTCTGGCCTGGTGGTCTACCTGAAGAACATGGTGGTGGCTGATCTCCTGATGCTACTCTCCTTCCCATGGCGTGTGGCTAACGATCTGGGCTATGGTGGCTGGCGAATGAAGGTGGTGGTGTGTCGCTACACGGCTGTACTTTTCTACCTCAGCATGTATACGGGCATTGCTTTCATGAGCCTCATTAGTTTGGAGCGCTATGTTAAAATCGTCCGtggctcctcttcctcctcatcctcGTCTCGCTTTTGCTCTTCCTCCGCCTCATCGCTCTTGCAGCGAGTACCAGTGGCCAGAATTCTGGCCTTCGTGGTTTGGGCCTTGCTGCTGGTCTGCATGCTGCCAAACACCCTATTGACTAATCGTCCAGCAGCTGAGGGCTGCTCGTGCGTGGAACTCAAGAGTTCATTGGGCCGTCGCTGGCATGAAGTCTCCGCCCACCTCATCGTGGCCATCTTCTGGTTGACCCTTGCGCTAATGGCGTTCTGTTACACCTCCATCGCTCGCCACGTGTACCGATCCTACAAAAGAGTGAACCGAGACGGCAGTGAGGCCAGCCGCAAGTCCAACCGCAGCATCTTCAGCCTGCTGGCAGTGTTTTTCCTGTGCTTCGTGCCCTACCACGTGTGCCGCGTGCCCTACACGCTAAGTCAGCGGCAAGGCTTCAAGCTTAGCCCCTACACTCGCTTCCAGCTCTTTCAGGCCAAAGAGGCCACACTTTTCCTGTCAGCCCTCAACGTGTGTCTAGACCCTGTCATTTACTTCCTCATGTGCAGGACATTCCGAGAGTTACTGCTGCGTAGGCTGTCTACTGCAGAGGTCGAGAACAGGAGGCCCTCTGTAACCAATGGACTCAGTGTCAGTAACTTGTAGAAGACTACGTAATGCGATAGCTCTTATGAAGTTGTACACTTCAAAACCAAAACAGTGGCGAAAATATCTATTAAAACTGCATCATAATCTGTACTAACAGTAAGAAAATGTTCAAATGAAAACACGAGCACAACTGGTCATATTCTCTAATGGCACTCTCTACCCACATCACTCCCAAAGGTGATGCTGCacagcacaggcgtctgttaactgatgtatcggaaccaataCATCACTGCCTTTTCAGTGGCTGGCCGAAGATTTCTTCCTCTtactctgagggagtttttctgTGCCACAGTTGCCACTACCACCTTGCCACTGTTGTCACTATCACTGTGGTGCTTACTCATACGAGATTTGGACCTGTATCTCTGTAAAGCAGCTTCATGACAACATTTGTTGCAAAAAGAGCTatacaattacattttaattgaattgaactgaattgctAGTGATATGGGGAGTCCAGCTCAGTGGGTGGGGTAATCAGCCTAGCAAAAAAGGGCAAAAATTTGGCTAAAAAAATGCGAAGGAACCACAACGATTTCCCTTTTTCATGCATTGTTAATAATAACAAGTGTACTTTGTCATTGGAGCTTATTTGCTGTAATTGTAATTGGGGGAAACTTGTAGTGACAGTGATTTGTGTGCATTTACTAAACAACACTgagatttcatttaaaaattccTGTATACCAAAATGGACAATGGAAATTAAAAGCCTTAGCAGTGCAATGGATTTGTAACAACATATTCTGtcaaatacagatttttttttgccactgttTTGTAGGTGTGAAAGCCAGtaggtttaaaatatattttattgttaataattattttttttaataaaatattttaaccaaTCGATCATATTGTCTTCATAAGTTAAAACAGTGGGTGGAGGGCACACTCATGTATCTACTGAAAAAAAGCACACAAGACAAAATATATCAGGTCTAGATATGTCCAGTTTAAGACAATTGCATGTGCAGTTGTTTAGGGTTTTCAggtttaatgctttttattttttggttggCCACCAACCTGTTTCATTCAGAA

Function

GO: NA

KEGG:

id description
K04299 P2RY14; P2Y purinoceptor 14

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18274 lncRNA upstream 44679 25699497 ~ 25703950 (+) True G13607
TU18275 lncRNA upstream 44679 25699497 ~ 25703950 (+) False G13607
TU18276 lncRNA upstream 46624 25699497 ~ 25702005 (+) False G13607
TU18246 lncRNA upstream 104266 25644013 ~ 25644363 (+) True G13589
TU18231 lncRNA upstream 105886 25603332 ~ 25642743 (+) False LOC103045399
TU18389 lncRNA downstream 28735 25794520 ~ 25795084 (+) False LOC103023549
XR_002650999.1 lncRNA downstream 141956 25907741 ~ 25908666 (+) True LOC111194239
TU18438 lncRNA downstream 237861 26003646 ~ 26006679 (+) True G13733
TU18543 lncRNA downstream 683482 26449267 ~ 26449469 (+) True G13822
TU18544 lncRNA downstream 683736 26449521 ~ 26450382 (+) False G13823
XM_022675572.1 mRNA upstream 6966 25732877 ~ 25741663 (+) True LOC103031763
XM_022675562.1 mRNA upstream 18960 25722719 ~ 25729669 (+) True rnf168
XM_007236766.3 mRNA upstream 26962 25704997 ~ 25721667 (+) True LOC103022406
XM_007236767.3 mRNA upstream 27904 25704994 ~ 25720725 (+) False LOC103022406
XM_007236764.3 mRNA upstream 49996 25693699 ~ 25698633 (+) True LOC103021785
XM_022675591.1 mRNA downstream 9010 25774795 ~ 25783047 (+) False LOC103023233
XM_007236769.3 mRNA downstream 9012 25774797 ~ 25783047 (+) True LOC103023233
XM_007236770.3 mRNA downstream 22799 25788584 ~ 25794650 (+) True LOC103023549
XM_007236771.3 mRNA downstream 35812 25801597 ~ 25808492 (+) True clrn1
XM_007236772.3 mRNA downstream 35812 25801597 ~ 25806920 (+) False clrn1
TU18257 other upstream 75440 25668748 ~ 25673189 (+) False mfrp
TU18064 other upstream 692526 25052513 ~ 25056103 (+) True G13445
TU17784 other upstream 891607 24855933 ~ 24857022 (+) True G13237
TU17745 other upstream 1031403 24714351 ~ 24717226 (+) False ccdc9
TU18843 other downstream 1243763 27009548 ~ 27040529 (+) True G14047
TU19049 other downstream 2284344 28050129 ~ 28056900 (+) False LOC103031366
TU19373 other downstream 3363282 29129067 ~ 29129373 (+) True G14444
TU19421 other downstream 3629375 29395160 ~ 29398166 (+) True G14480
TU19448 other downstream 3908389 29674174 ~ 29689149 (+) False nubp1

Expression Profile