Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU49434 |
| length | 632 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC111192407 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 15819316 ~ 15835522 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49420 | lncRNA | downstream | 18052 | 15801030 ~ 15801264 (-) | True | G36681 |
| XR_002649904.1 | lncRNA | downstream | 23947 | 15791097 ~ 15795369 (-) | True | LOC111192406 |
| TU49392 | lncRNA | downstream | 44723 | 15772893 ~ 15774593 (-) | False | G36677 |
| TU49413 | lncRNA | downstream | 57708 | 15755613 ~ 15761608 (-) | False | G36677 |
| TU49542 | lncRNA | upstream | 27788 | 15863282 ~ 15864264 (-) | True | G36754 |
| TU49543 | lncRNA | upstream | 114281 | 15949775 ~ 15950699 (-) | True | G36755 |
| TU49553 | lncRNA | upstream | 221971 | 16057465 ~ 16058635 (-) | True | G36765 |
| TU49595 | lncRNA | upstream | 378306 | 16213800 ~ 16214829 (-) | True | G36800 |
| TU49602 | lncRNA | upstream | 407583 | 16243077 ~ 16243333 (-) | True | G36805 |
| XM_022669435.1 | mRNA | downstream | 40469 | 15772958 ~ 15778847 (-) | True | LOC103033657 |
| XM_022669182.1 | mRNA | downstream | 49847 | 15746284 ~ 15769469 (-) | True | LOC103024156 |
| XM_022669183.1 | mRNA | downstream | 49848 | 15746284 ~ 15769468 (-) | False | LOC103024156 |
| XM_022669184.1 | mRNA | downstream | 49848 | 15746285 ~ 15769468 (-) | False | LOC103024156 |
| XM_007255138.3 | mRNA | downstream | 82241 | 15723259 ~ 15737075 (-) | True | LOC103025516 |
| XM_007255130.3 | mRNA | upstream | 1611 | 15837105 ~ 15840516 (-) | True | LOC103023526 |
| XM_022669186.1 | mRNA | upstream | 5899 | 15841393 ~ 15851677 (-) | False | LOC103023209 |
| XM_007255129.3 | mRNA | upstream | 5899 | 15841393 ~ 15851677 (-) | True | LOC103023209 |
| XM_022669187.1 | mRNA | upstream | 38865 | 15874359 ~ 16026122 (-) | True | ank3 |
| XM_007255123.3 | mRNA | upstream | 360919 | 16196413 ~ 16208914 (-) | True | LOC103021447 |
| TU49397 | other | downstream | 49787 | 15755613 ~ 15769529 (-) | False | G36677 |
| TU49415 | other | downstream | 49787 | 15755613 ~ 15769529 (-) | False | G36677 |
| TU49409 | other | downstream | 49825 | 15755613 ~ 15769491 (-) | False | G36677 |
| XR_002649883.1 | other | downstream | 60453 | 15758390 ~ 15758863 (-) | True | LOC111192378 |
| trnal-caa_19 | other | downstream | 862559 | 14956645 ~ 14956757 (-) | True | trnal-caa_19 |
| TU49443 | other | upstream | 1611 | 15837105 ~ 15840485 (-) | False | LOC103023526 |
| TU50113 | other | upstream | 1180634 | 17016128 ~ 17018918 (-) | True | G37183 |
| trnal-uag_1 | other | upstream | 1259751 | 17095245 ~ 17095326 (-) | True | trnal-uag_1 |
| TU50180 | other | upstream | 1343884 | 17179378 ~ 17184405 (-) | False | LOC103030148 |
| TU50205 | other | upstream | 1538690 | 17374184 ~ 17381597 (-) | True | LOC103024241 |
