RNA id: XM_022663672.1


Basic Information

Item Value
RNA id XM_022663672.1
length 4177
RNA type mRNA
GC content 0.44
exon number 4
gene id LOC103037326
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 58934892 ~ 58942197 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

cctcctcctcctcctgctgctgctgctggtggttctggttctgggttGTTTCTGCTGTAGCTGTGTGTGATCTTCaggctggagctgctgctgctgctgtatgaAGGTCTCTTCTCCCATCAAAGAGTAACATGCGAGTGTTTGTAATGAAGAGGACCTGCTTGCTGAGCTGCTTTCTAGCTCTGCTGCTTCCACTCCTTTCACGGCAGGAGGAGCACAGCAAGCTGCTGCTGGTGTCCTTTGATGGCTTCCGCTGGGACTATGTGGACAGGGTGCCCACGCCCAACTTCCACGCTCTCATGGAGGAAGGTGTGCAGGTGGAGAAGGTGGAGAACACCTACATCACCAAGACCCTCCCCAACCACTACACTCTAGTAACAGGACTGCACGCAGAGAGCCACGGCGTCGTAGCCAATGAAATGTATGACCCAGTTCTGAACCGCTCCTTCTCTATGGAGGGTCCAGAGGTGTACGACTCTCGATGGTGGGAGGAGGCCGTTCCTCTGTGGGTCACCACTCAGAAGGCTGGTCGGAGGAGCGGAGCTGCCATGTGGCCCGGATCTGACGTGGCTATCAGAGGAGTCTACCCAACCCATTATGTGCCATACAATGCCTCTATGCCCTTTGAGATGAGGGTGGAGAAGCTCATCAGCTGGTTCTTGGGAACAGAGGCCATCGATTTCGGGGTTCTTTACTGGGAGGAGCCTGACGAGACTGGTCATAATGTGGGGCCAGAGAGCCCCCTTATGGATGTGGTCATCGAGGACATTGATAGAAAGCTGGGTTTCCTCAGAGAGAAGCTGAAGATATCTGGACTTTATGATAAAATCAATCTCATCGTCACCAGTGACCACGGTATGACGCAGCTATCGCGCAACAAGATCATTGAGCTGGACGCCTACGTGAGTCAAGACCTCTACACATGGATAGACAAGAGCCCAGTGGTGGGAATTCTGCCTAAAGAGGGTAAGTTCGAGGAGGTCTATAATTCACTGGAGAATGCAAATCCTAACATGGTTGTGTACAAGAAAGAAGACATCCCTGATTATTTTCACTACAAACACAACGCCAGGATCATGCCGATTATAATTGAGGCCAAAGAAGGATGGACAATCGtgaagaacagaacagaacccTTTATGATGGGCAACCATGGCTATGATAACCACTTACACAGCATGCACCCGGTGTTTGTCGCCCGTGGACCCTCGTTCCGCACTGGCTACACAAAGACCGCCATGCGCTCTGTTGACCTCTACCCTCTCATGTGTTACATTCTCGGTGTTCAGCCGCTGCCCAACAATGGCTCTCTGGCGAGTGTACAGGATCTCCTGGTGGAAAAACCGACCCCCAGACCAACACTGCCGTCTGTACCCAATGAACCCTCCTACGCCTGGGCCTTAGGCTTATTTCTGGGCGCCGCCCTGGTGGTTGGGTTCCTTGTGCCTTTTGTAAAGCAGGTGACACAGAGGCAGCTTCCACCACTGCCCCTCAGCAACCAGGAGATATCACAGCCCTTACTGCAGGAAGACCACAAAGTTGCTTTAATTCATGTACCAGTCAAACATGGCCTGAGTGCCAAATCAAATCAGTACTACTGGTGCCATGCCTAGGCTTAATAAATCAATCTATTTGTGGACAAAAGTTACAGGAAAAGAAATACAAGAACAATGACCAAGTTAAAGATGTCCAAGCTgactttgattttattttcagtttctgaattcttgtggcctatatatttcaagaaagggaaaaaaactacGAGGTATTAACCTTCACAAAATCAGATtcagaaatataataattttagggatgccttaatattaaaatacactgctcaaaaaactAAGGGGAACACTAAAATGACACATTCTAGAGctcaatgaataaaatattccggctgaaaatttatttattacatacagGAAACCgttgagaaaaaaataacaaaaatgatcaatgtaaataaaaaaaatattatcccATGGGGGTCTGGATTTGGAATCATTCTCAACATCAAAGTGGAAAATCAAATGACATGCAGATCCAACTTCCTTAAgacaaaatgaggctcagtagtgtgtgtggcctccacgagCCTGTAAAGCCTCCCTACAACATGATCTCACAGATGTGCTGGATTGGACTCAGGTCTGGGGAATGGGCGAGCCAGTCCATAGCATCAACACTctagccacatgaggtctaacATTGTCCTGCAATAGAAGGAcgccagggccaaccgcaccagcatatggtctcacaatgggtctgaggatctcattcCCGGTACCTAacggcagtcaggctacctctggctAGCACATGGAAAGTAAAGAAATGCgtccccacaccattactgatcATTACTGGTCATGCTGGAGGATGTTCCAGGCAGCAGACTGTTCTCCACGGCATCTCCACACTCATGTCATGTCTCTTCCTTGCACAAAGGAGGAGGTAGCAGTGCTGCTGttggttgttgccctcctatgACCCCCTCCATTTCTCCTGGTATCTACTCCATGCTCTGGACACtgtgctaacagacacagcaaaccttcctGACACAGCTcacattgatgtgccatcctggatgagctgcactacctgagcaacTTCTGTGGGTTGTAGACAGCGCCTCATGCAACCTCTATGGTGAGAGaactaacaaaataaaaaaacgtgacaaaaacatcagccagaaaggatgagaacagagaaaaggtcTGTGGTCACCACCTGCAAAACCACTCCTTTATAGGGggttgtcttgctaattgcTCCTCATTTCTACCTGTTGTCTGTttcatttgcacaacagcaggtgaaattgataaACAACACAATGGAACTCAAAGTCAACCACACTTATTGTTAAAGTGTTCCCttcatttttttgagcagtataTTTGAACGGATTGGGTAGTAGCTATTTAATACCAATCCAGTTCTGAGACATTTAACCCCGGTGCCACCTGATGCTCTCAAGGCACCGTTAGCAGACATTACTGCAGAGCCTGCAGTACTGAGGAGAGTTTTCAGAAGGTAAATGAGAAAGATCGGTGTGTAACTTTTTTATAATAGAATAGTAAAACATATCtggaaacatttaaaacaataatacaaacaCTCAGTATTACCAGTGAGATAACAGTGCAccttaaaaaatctaattattttCCTTCAGTATTTATTAGCAGCTCGTACTACATACTCTGTGTGGTTGCACTGTTTAAACACATAGAACGGTTAAATGGGATTAGTATTGGCTGATCCTCTGCATTAAAAGACTTTGGTCAGAGTGGGACTTCcccaattctgttttttttttcttaaggtCAGTACTAAATGTTTGAGGGGGAAAAAAGGTCCATTCTCTGTTAAGTTCTTGGACTGAACCTTTTGAGGGATATTtgtatcttttattatttagatgcttttatactgtgttttctttattaagaTTTTCTTGAACAAGTGAAGTGCAATGACTACAtgctttaatgttttgtttgtgaAACTGGCAGAGtaatgttttatgttgtttacATGATGTAGGTAGTTAATAAGCTGCCTCTGTGTTGCACTAAGATCAACATAAGCTAATCAGGATTTGTAGAAATGAAAGAGAATAAGGAGAACCAAAGTGGTTTTAGAACGGCTGCATTTTGCACAGCATTTTCCCATgtgtttaatctttttttaaaaaaggctaCGTGCCAAAAGTCTTTAGCTACTAATCTGGGAAACTCTGGGTACAAACTAGTGGCAGAGCAGTagattcctttgattttctaaTTTCAGATTCAGAACTTTGCATATGAGGCCCCAACTGGGCAGAACCACTGTGATCTATCTTCTACAGGTaccaaaacaaagaaaaagaacttATGAAGTATTTAACATAGTCTTTGGTGTAGATGTTACTGGTAGGATACATAGTTATGCATCATTTTGCTTGCAATCTTACGCTTTTATGGTGTGGCTTAGTTTAAAGGCCTTTAAtttaagagaggaaaaaaaacaattagatgactaaattaagtgtttttaattaagaattaagtgtttctttataaatgtagtGTTTAAACTGTGAAAAGACTGTAACTATGATTTTTACTGGTGTTCTACCTTTTTATTAAAGACTTGTGCAAGTGGCACATTTCTC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K18398 ENPP5; ectonucleotide pyrophosphatase/phosphodiesterase family member 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU39290 lncRNA downstream 46483 58888118 ~ 58888409 (-) True G29291
TU39278 lncRNA downstream 71397 58862851 ~ 58863495 (-) True G29279
TU39266 lncRNA downstream 83541 58848687 ~ 58851351 (-) True G29270
TU39268 lncRNA downstream 83541 58848687 ~ 58851351 (-) False G29270
TU39253 lncRNA downstream 115039 58818634 ~ 58819853 (-) True G29260
TU39359 lncRNA upstream 56346 58998543 ~ 59036129 (-) False LOC103023855
TU39393 lncRNA upstream 189344 59131541 ~ 59132137 (-) True G29369
TU39394 lncRNA upstream 191214 59133411 ~ 59133672 (-) True G29370
TU39431 lncRNA upstream 294300 59236497 ~ 59243835 (-) True G29393
TU39464 lncRNA upstream 382796 59324993 ~ 59325712 (-) True G29417
XM_007258168.3 mRNA downstream 340966 58582728 ~ 58593926 (-) True LOC103031445
XM_007258171.3 mRNA downstream 432361 58498747 ~ 58502531 (-) True LOC103032305
XM_007258172.3 mRNA downstream 439434 58485608 ~ 58495458 (-) True LOC103032621
XM_007258175.3 mRNA downstream 516046 58417381 ~ 58418846 (-) True LOC103033450
XM_007258176.3 mRNA downstream 524311 58407436 ~ 58410581 (-) True LOC103033774
XM_022663682.1 mRNA upstream 5456 58947653 ~ 58952885 (-) True LOC111189957
XM_007256627.3 mRNA upstream 34465 58976662 ~ 58996762 (-) True ccm2
XM_007256626.3 mRNA upstream 34465 58976662 ~ 58996757 (-) False ccm2
XM_007256628.3 mRNA upstream 34465 58976662 ~ 58985709 (-) False ccm2
XM_007256629.3 mRNA upstream 56344 58998541 ~ 59085886 (-) True LOC103023855
TU39330 other downstream 103 58932963 ~ 58934789 (-) True G29317
TU39086 other downstream 760188 58169321 ~ 58174704 (-) False LOC111189852
XR_452898.2 other downstream 2240767 56646027 ~ 56694125 (-) False LOC103031416
TU38322 other downstream 3118294 55815872 ~ 55816598 (-) True G28536
TU38270 other downstream 3328006 55602870 ~ 55606886 (-) True G28501
TU39539 other upstream 495403 59437600 ~ 59438298 (-) True G29478
TU39714 other upstream 1215341 60157538 ~ 60162024 (-) False LOC103034188
XR_002649735.1 other upstream 1426849 60369046 ~ 60369614 (-) True LOC111191938
XR_002649101.1 other upstream 2891251 61833448 ~ 61887888 (-) False LOC103043586
TU40670 other upstream 4268084 63210281 ~ 63288108 (-) False fryl

Expression Profile