Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002650628.1 |
| length | 730 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC111193691 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035909.1 |
| NCBI id | CM008312.1 |
| chromosome length | 44161018 |
| location | 27160762 ~ 27189599 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU153959 | lncRNA | downstream | 34393 | 27126165 ~ 27126369 (-) | True | G113949 |
| TU153954 | lncRNA | downstream | 281215 | 26817172 ~ 26879547 (-) | True | G113944 |
| TU153952 | lncRNA | downstream | 471636 | 26688729 ~ 26689126 (-) | True | G113942 |
| TU153927 | lncRNA | downstream | 524460 | 26633723 ~ 26636302 (-) | True | LOC111193690 |
| XR_002650627.1 | lncRNA | downstream | 524520 | 26633735 ~ 26636242 (-) | False | LOC111193690 |
| TU153966 | lncRNA | upstream | 8304 | 27197903 ~ 27198191 (-) | True | G113956 |
| TU153974 | lncRNA | upstream | 83251 | 27272850 ~ 27273123 (-) | True | G113964 |
| XR_002650696.1 | lncRNA | upstream | 276345 | 27465944 ~ 27467318 (-) | True | LOC111193753 |
| XR_002650697.1 | lncRNA | upstream | 433193 | 27622792 ~ 27623735 (-) | True | LOC111193754 |
| TU154136 | lncRNA | upstream | 452834 | 27642433 ~ 27643380 (-) | False | G114074 |
| XM_022675617.1 | mRNA | downstream | 91530 | 26723797 ~ 27069232 (-) | True | cdh22 |
| XM_007252675.3 | mRNA | downstream | 858367 | 26292415 ~ 26302395 (-) | True | gcnt7 |
| XM_022675612.1 | mRNA | downstream | 954192 | 26152447 ~ 26206570 (-) | True | eya2 |
| XM_022675611.1 | mRNA | downstream | 1059241 | 26091651 ~ 26101521 (-) | True | LOC103030576 |
| XM_022675608.1 | mRNA | downstream | 1271100 | 25711231 ~ 25889662 (-) | False | LOC103035347 |
| XM_022675091.1 | mRNA | upstream | 103960 | 27293559 ~ 27317236 (-) | True | znfx1 |
| XM_022675618.1 | mRNA | upstream | 134270 | 27323869 ~ 27344463 (-) | True | ddx27 |
| XM_007252677.2 | mRNA | upstream | 157868 | 27347467 ~ 27352451 (-) | True | snrpb |
| XM_007252679.3 | mRNA | upstream | 168589 | 27358188 ~ 27385149 (-) | True | LOC103032591 |
| XM_022675619.1 | mRNA | upstream | 323800 | 27513399 ~ 27563022 (-) | True | LOC103038159 |
| TU153885 | other | downstream | 767565 | 26346140 ~ 26393197 (-) | True | G113888 |
| TU153804 | other | downstream | 1098478 | 26032895 ~ 26062284 (-) | True | G113826 |
| trnar-ccg_1 | other | downstream | 2159006 | 25001684 ~ 25001756 (-) | True | trnar-ccg_1 |
| TU153097 | other | downstream | 3259264 | 23901123 ~ 23901498 (-) | True | G113304 |
| TU153063 | other | downstream | 3367301 | 23735954 ~ 23793461 (-) | True | G113276 |
| XR_002650695.1 | other | upstream | 127809 | 27317408 ~ 27319945 (-) | True | LOC111193752 |
| TU154209 | other | upstream | 935637 | 28125236 ~ 28129856 (-) | True | G114134 |
| TU154457 | other | upstream | 1158666 | 28348265 ~ 28361481 (-) | True | G114270 |
| TU154464 | other | upstream | 1158666 | 28348265 ~ 28361481 (-) | False | G114270 |
| TU154468 | other | upstream | 1158666 | 28348265 ~ 28361481 (-) | False | G114270 |
