RNA id: TU99370


Basic Information

Item Value
RNA id TU99370
length 236
lncRNA type inter_gene
GC content 0.25
exon number 1
gene id G87268
representative True

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 1050801 ~ 1051036 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAATCCTTTCTTTGTATTGGTCTTAAGTAATATTCTAATTTTCTGAGATACTGAATTTGGGATTTTCCTTAGTTGTCAGTTATAATCATCAAAATTAAAAGAAATAAACATTTGAAATATATCAGTCTGTGTGTAATGAATGAGTATAATATACAAGTTTCACTTTTTGAATGGAATTAGTGAAATAAATCAACTTTTTGATGATATTCTAATTATATGACCAGCACCTGTATAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99369 lncRNA upstream 259 1050262 ~ 1050542 (+) True G87267
TU99363 lncRNA upstream 13487 1036698 ~ 1037314 (+) True G87261
TU99360 lncRNA upstream 18955 1031437 ~ 1031846 (+) True G87258
TU99305 lncRNA upstream 32012 1016228 ~ 1018789 (+) True G87214
TU99303 lncRNA upstream 33475 1016228 ~ 1016275 (+) False G87214
TU99371 lncRNA downstream 740 1051776 ~ 1052032 (+) True G87269
TU99325 lncRNA downstream 70182 1121218 ~ 1129967 (+) True G87224
TU99326 lncRNA downstream 79954 1130990 ~ 1136259 (+) True G87225
TU99334 lncRNA downstream 90924 1141960 ~ 1143392 (+) True G87233
TU99426 lncRNA downstream 167979 1219015 ~ 1233531 (+) True G87312
CI01000015_01020856_01025441.mRNA mRNA upstream 25148 1020856 ~ 1025653 (+) True CI01000015_01020856_01025441
CI01000015_01015968_01016675.mRNA mRNA upstream 33955 1015623 ~ 1016846 (+) False CI01000015_01015968_01016675
CI01000015_01002365_01011214.mRNA mRNA upstream 39526 1002365 ~ 1011275 (+) False CI01000015_01002365_01011214
CI01000015_00970175_00973727.mRNA mRNA upstream 77061 970175 ~ 973740 (+) True CI01000015_00970175_00973727
CI01000015_00890625_00902801.mRNA mRNA upstream 147805 890625 ~ 902996 (+) True CI01000015_00890625_00902801
CI01000015_01080504_01101091.mRNA mRNA downstream 29468 1080504 ~ 1101383 (+) True CI01000015_01080504_01101091
CI01000015_01288157_01300925.mRNA mRNA downstream 237121 1288157 ~ 1301131 (+) True CI01000015_01288157_01300925
CI01000015_01307849_01327079.mRNA mRNA downstream 255935 1306971 ~ 1328376 (+) False CI01000015_01307849_01327079
CI01000015_01349369_01366864.mRNA mRNA downstream 298333 1349369 ~ 1367511 (+) True CI01000015_01349369_01366864
CI01000015_01405454_01407722.mRNA mRNA downstream 353945 1404981 ~ 1408735 (+) False CI01000015_01405454_01407722
TU99556 other downstream 560047 1611083 ~ 1611387 (+) True G87432
TU100157 other downstream 824968 1876004 ~ 1876594 (+) True G87972
TU100381 other downstream 1332980 2384016 ~ 2500594 (+) False G88172
TU100556 other downstream 1461062 2512970 ~ 2513011 (+) True G88328
TU100954 other downstream 1971960 3026680 ~ 3030290 (+) False G88670

Expression Profile