RNA id: TU151803


Basic Information

Item Value
RNA id TU151803
length 210
lncRNA type antisense_over
GC content 0.42
exon number 1
gene id G133519
representative True

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11332066 ~ 11332275 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CGTGAATGTGCACCTGGGGGGTTTGTGTGCTTCTGCAAATTTACTTCTCTTGGTATGTATCTGCCAGTGAAAGGATGTTTGATTCAATATTTCAATGCAATAAGAACACTATTTGACCCAGATTAGCTAAAAATCTCAGCGTATGCATGTGTAATGGAAATGAGTAGTTCCTGACGCTACTCAGGCGATTCCACCCACTAAGCTTAGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151799 lncRNA upstream 7929 11321804 ~ 11324137 (+) False G133516
TU151798 lncRNA upstream 7929 11323355 ~ 11324137 (+) True G133516
TU151797 lncRNA upstream 10513 11321255 ~ 11321553 (+) True G133515
TU151796 lncRNA upstream 10936 11320865 ~ 11321130 (+) True G133514
TU151781 lncRNA upstream 75799 11256009 ~ 11256267 (+) True G133501
TU151804 lncRNA downstream 1066 11333341 ~ 11333687 (+) True G133520
TU151805 lncRNA downstream 1598 11333873 ~ 11334103 (+) True G133521
TU151806 lncRNA downstream 3195 11335470 ~ 11336831 (+) True G133522
TU151808 lncRNA downstream 8364 11340639 ~ 11342488 (+) True G133523
TU151814 lncRNA downstream 15688 11347963 ~ 11348924 (+) True G133529
CI01000026_11298219_11305000.mRNA mRNA upstream 27053 11298219 ~ 11305013 (+) True CI01000026_11298219_11305000
CI01000026_11266022_11278889.mRNA mRNA upstream 53167 11266022 ~ 11278899 (+) True CI01000026_11266022_11278889
CI01000026_11262923_11264188.mRNA mRNA upstream 67532 11261081 ~ 11264534 (+) True CI01000026_11262923_11264188
CI01000026_11241496_11246081.mRNA mRNA upstream 85985 11241496 ~ 11246081 (+) False CI01000026_11241496_11246081
CI01000026_11239339_11240254.mRNA mRNA upstream 91633 11239339 ~ 11240433 (+) True CI01000026_11239339_11240254
CI01000026_11403059_11415298.mRNA mRNA downstream 70784 11403059 ~ 11415512 (+) True CI01000026_11403059_11415298
CI01000026_11436071_11446054.mRNA mRNA downstream 103226 11435501 ~ 11446322 (+) True CI01000026_11436071_11446054
CI01000026_11456632_11473446.mRNA mRNA downstream 124357 11456632 ~ 11473653 (+) True CI01000026_11456632_11473446
CI01000026_11483300_11485455.mRNA mRNA downstream 151025 11483300 ~ 11486080 (+) True CI01000026_11483300_11485455
CI01000026_11497016_11677778.mRNA mRNA downstream 164741 11497016 ~ 11677778 (+) True CI01000026_11497016_11677778
TU151777 other upstream 76993 11244933 ~ 11255073 (+) True G133497
TU151694 other upstream 252986 11070768 ~ 11070876 (+) True G133429
TU151441 other upstream 1170105 10159819 ~ 10161961 (+) True G133192
TU150881 other upstream 1762906 9568739 ~ 9569160 (+) False G132667
TU149067 other upstream 2825279 8501408 ~ 8506787 (+) True G131077
TU151829 other downstream 143842 11476117 ~ 11476907 (+) False G133542

Expression Profile