Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000037_04080145_04081691.mRNA |
| length | 3733 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 4 |
| gene id | CI01000037_04080145_04081691 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000037 |
| NCBI id | null |
| chromosome length | 4612320 |
| location | 4078481 ~ 4082806 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU200698 | lncRNA | upstream | 7625 | 4070632 ~ 4070856 (+) | True | G176699 |
| TU200696 | lncRNA | upstream | 9487 | 4068782 ~ 4068994 (+) | True | G176697 |
| TU200689 | lncRNA | upstream | 12567 | 4053667 ~ 4065573 (+) | True | G176692 |
| TU200688 | lncRNA | upstream | 25637 | 4052464 ~ 4052844 (+) | True | G176691 |
| TU200687 | lncRNA | upstream | 26289 | 4051977 ~ 4052192 (+) | True | G176690 |
| TU200729 | lncRNA | downstream | 16997 | 4099803 ~ 4100459 (+) | True | G176723 |
| TU200784 | lncRNA | downstream | 97667 | 4180473 ~ 4189388 (+) | True | G176773 |
| TU200797 | lncRNA | downstream | 172282 | 4255088 ~ 4255537 (+) | True | G176786 |
| TU200780 | lncRNA | downstream | 180185 | 4262991 ~ 4266261 (+) | True | CI01000037_04240865_04265240 |
| TU200779 | lncRNA | downstream | 197808 | 4280614 ~ 4281394 (+) | True | G176768 |
| CI01000037_04061560_04065802.mRNA | mRNA | upstream | 12440 | 4061560 ~ 4066041 (+) | False | CI01000037_04061560_04065802 |
| CI01000037_04050140_04050646.mRNA | mRNA | upstream | 27598 | 4049165 ~ 4050883 (+) | False | CI01000037_04050140_04050646 |
| CI01000037_03946645_03954021.mRNA | mRNA | upstream | 124167 | 3945995 ~ 3954314 (+) | True | CI01000037_03946645_03954021 |
| CI01000037_03901647_03902747.mRNA | mRNA | upstream | 175734 | 3899399 ~ 3902747 (+) | True | CI01000037_03901647_03902747 |
| CI01000037_03875808_03891566.mRNA | mRNA | upstream | 186094 | 3875488 ~ 3892387 (+) | True | CI01000037_03875808_03891566 |
| CI01000037_04168194_04170478.mRNA | mRNA | downstream | 85388 | 4168194 ~ 4171137 (+) | True | CI01000037_04168194_04170478 |
| CI01000037_04175833_04178651.mRNA | mRNA | downstream | 93027 | 4175833 ~ 4178651 (+) | True | CI01000037_04175833_04178651 |
| CI01000037_04213179_04218057.mRNA | mRNA | downstream | 130101 | 4212907 ~ 4218305 (+) | False | CI01000037_04213179_04218057 |
| CI01000037_04240865_04265240.mRNA | mRNA | downstream | 157817 | 4240623 ~ 4265407 (+) | False | CI01000037_04240865_04265240 |
| CI01000037_04295697_04296550.mRNA | mRNA | downstream | 212891 | 4295697 ~ 4297038 (+) | True | CI01000037_04295697_04296550 |
| TU200353 | other | upstream | 990513 | 2976862 ~ 3087968 (+) | True | G176377 |
| TU200317 | other | upstream | 1238428 | 2839760 ~ 2840053 (+) | True | G176346 |
| TU199493 | other | upstream | 2108090 | 1970185 ~ 1970391 (+) | True | G175626 |
| TU198758 | other | upstream | 2401074 | 1677210 ~ 1677407 (+) | True | CI01000037_01674415_01677266 |
| TU198740 | other | upstream | 2464207 | 1613890 ~ 1614274 (+) | False | G174949 |
| TU200774 | other | downstream | 130477 | 4213283 ~ 4218147 (+) | True | CI01000037_04213179_04218057 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| striped catfish (Pangasianodon hypophthalmus) | TU51773 | True | 2460 | lncRNA | 0.38 | 2 | NC_047597.1 | 10158929 ~ 10161502 (-) |
