RNA id: TCONS_00018525



Basic Information


Item Value
RNA id TCONS_00018525
length 1342
RNA type mRNA
GC content 0.37
exon number 2
gene id XLOC_009426
representative True

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 37608742 ~ 37610434 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GAAGAAGACGGATCAAGATCAAGACTCGACTCTTTCCACTGCATTGAGACCTCAAAGATGGAAAACAGCAGTTTTGAGCTTAAAAATGTGACTGGAAACTCAACAGACAAGAGCACAGTGGAGGATGAGGGATTTAAGATTTGTCTTGCCTGCATTTTCTTTTTCACCGTCTCAGTGGGTCTCATTGGAAATGGGCTGGTCATATTTTTGGCCGGCTGCAGAATGAAGATGACTGTCAACTCCATTTGGTTTCTGAATTTGGCGATTGCagatttcatgtttattttagtttcaatCACAAATGCTTCCTTTATCTTGAGCAAGCAGCACAGTGCCTTCACAGAGAACCTTTTCATCATCGCAACATCTCTAAATCTGTTTGTTAGTGTTTGGTCTCTTGTAGTTATCAGTCTGGATCGATGTCTGTGCACATGGATGGCTGTTTGGGCTCAAAATAACAGAACTCTGCGTAAAGCCAGAATCATCTGCATCATCATCTGGGTTTCATCCATCGGCTACATTCTcccttttttcaatttttttaagatTTCAGGCACAATTCTTGTCACATATGAATTTATAGTGGTCTTTCTCATCCCCTTTCTGATCATTGCATCTTCATACATCGCTATTGGAGTAAAAATCAAACGCCTCAACATGGGGAAGCAGCTCAGGTCATACAGACTCATTATAACTGTAATCCTGACTTTCTTCATCTGTTCATTTCCACACCATGTTTGCTGGATTTGGGGAGTATGGGCAGAAAATAATAATTGGATTCTCACTGATCAATTTgggaagatattttattttactttctaccTGATTAATCTCAACAGCAGTCTGAACCCATTTCtctatgtgttcatgtgtgatgaTTATAAGAAGAACCTGAAACAGTCTCTGGTGCTGGTGCTGGAGACGGCGTTTGAAGATCATCTGGACATTAAAGATATGAGACAGACACAACATGATTAACAGGCAAAACAAACCACACTTGAATTGCTAGAAATGTAGAACTTTTTTGAGGAACAAAAAAGTTTTGCAATCATTGATAATAATGCATATTATTATCACAGTTAAACAGTAACTGTATAATACTGTCTGTATTCATCATAATTTTCTGTCTAAGACATCTCTTGTAAATGGTAGTTTTATAAATCCAGGTTTTGTGCTTGGTTTAGTTTTGTGTTCTTGTTTTCAGTGTCTGTATATTCACTTAGGCCTGATTTCATTGTTTAGTTCAGTGTGTGTATTTAAGTCTTAGTCTGTCTTCATTAATGTTTATCTCGTTGACCAGTTCTTGTATTTAATTGGATTAAAAGAATTGCTGTGTACATAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000156856

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00018519 lncRNA downstream 344477 37259354 ~ 37264265 (-) True XLOC_009422
TCONS_00018840 lncRNA downstream 823969 36784479 ~ 36784773 (-) True XLOC_009419
TCONS_00019218 lncRNA downstream 1105553 36500206 ~ 36503189 (-) True XLOC_009416
TCONS_00018839 lncRNA downstream 1170896 36421591 ~ 36437846 (-) True XLOC_009415
TCONS_00018510 lncRNA downstream 1239056 36365724 ~ 36369686 (-) True XLOC_009414
TCONS_00019219 lncRNA upstream 120621 37731055 ~ 37733875 (-) True XLOC_009433
TCONS_00018545 lncRNA upstream 216951 37827385 ~ 37829157 (-) True XLOC_009441
TCONS_00018553 lncRNA upstream 266282 37876716 ~ 37880887 (-) False XLOC_009444
TCONS_00018552 lncRNA upstream 266282 37876716 ~ 37880887 (-) True XLOC_009444
TCONS_00019220 lncRNA upstream 685723 38296157 ~ 38297734 (-) True XLOC_009453
TCONS_00018524 mRNA downstream 19142 37562582 ~ 37589600 (-) True XLOC_009425
TCONS_00018522 mRNA downstream 64903 37457009 ~ 37543839 (-) False XLOC_009424
TCONS_00018523 mRNA downstream 65151 37460783 ~ 37543591 (-) True XLOC_009424
TCONS_00018520 mRNA downstream 172660 37419552 ~ 37436082 (-) False XLOC_009423
TCONS_00018521 mRNA downstream 183274 37419970 ~ 37425468 (-) True XLOC_009423
TCONS_00018526 mRNA upstream 8570 37619004 ~ 37620167 (-) True XLOC_009427
TCONS_00018527 mRNA upstream 28750 37639184 ~ 37645814 (-) True XLOC_009428
TCONS_00018528 mRNA upstream 38834 37649268 ~ 37651161 (-) False XLOC_009429
TCONS_00018529 mRNA upstream 38855 37649289 ~ 37674120 (-) False XLOC_009429
TCONS_00018530 mRNA upstream 61439 37671873 ~ 37673733 (-) True XLOC_009429
TCONS_00018517 other downstream 734376 36874251 ~ 36874366 (-) True XLOC_009420
TCONS_00018513 other downstream 1075495 36529465 ~ 36533247 (-) True XLOC_009417
TCONS_00018488 other downstream 2396505 35167295 ~ 35212237 (-) True XLOC_009400
TCONS_00018481 other downstream 2495956 35095205 ~ 35112786 (-) False XLOC_009398
TCONS_00018452 other downstream 3329207 34279421 ~ 34279535 (-) True XLOC_009383
TCONS_00018535 other upstream 117400 37727834 ~ 37729166 (-) True XLOC_009432
TCONS_00018590 other upstream 2458577 40069011 ~ 40069127 (-) True XLOC_009467
TCONS_00018622 other upstream 3782967 41393401 ~ 41396073 (-) True XLOC_009478
TCONS_00018633 other upstream 3918826 41529260 ~ 41543440 (-) True XLOC_009482
TCONS_00018660 other upstream 4667239 42277673 ~ 42283815 (-) True XLOC_009502

Expression Profile


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