RNA id: TCONS_00018530


Basic Information

Item Value
RNA id TCONS_00018530
length 1506
RNA type mRNA
GC content 0.38
exon number 2
gene id XLOC_009429
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 37649268 ~ 37674120 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTGAAAAATATCTCCTGACTCCTACTTCTTAATCAAAGTGCTGAAGTGGTCAGCAACATTAAATAACTGGCTTGCTAAATTGGGCAATACCCAACAGCAGATATTTGCTGATGACCATATTTAGTTTTATGAGGATGTACCAGGGTTTGCTGTGGTATAAAACCAACTATCGATCTGCACACGCAAGAAGACGGAACAAGATCAAGACTTAACTCTTTCCACTGCATTGACACCTCAACATGGAAAACAGCAGTTTTGGGCTGAAAAATGTGATTGGAGGTTTAACAGACAAGAGCACTTTGGAGATCAAGGGATTTGGGATTTTTTCTGCCTGCATTTTCTTTTCCACCATCATAGTGGGTGTCATTGGAAATGGGCTGGTCATATTTCTGGCCGGCTGCAGAATGAAGACGACTGTAAACTCCATTTGGTTTCTGAATTTGGCGATTGCAGACTTCATCTTCCTTTTATTTTCAGTCACAAATTTTTGCCTAATCTTGAGCAATCAGCACAGTGATCTCACATACATATTTATCTTCATCGCAGCATGTCTAAATCTGTTTGTTAGCGTTTGGTTTCTTGTAGTCATCAGTCTGGATCGATGCCTGTGCACATGGATGGCTGTTTGGGCTCAAAATAACAGAACTCTGCGTAAAGCCAGAATCATCTGCATCATCATCTGGGTTTCATCCATCGGCTACATTTTACCTTTCTTGAACGTTTTTGAGATTACAGTTACAATTCGTGTCACATATGGATTCATAGTGGACTTTCTCATCCCCTTCCTGACCATTGCATCTTCATACATCGCTATTGGAGTAAAAGTCAAACGCCTCAAAAAGAGGAAGCAGCTCAGGTCATACAGACTTATTATAACTGTAATCCTGACTTTCTTCATCTGTTCATTTccacaacatgtttgctatttTTGGATGGTAAGGGCAGAAAATAATAATTGGACTCTCACTGATCAATTTTGGAAGTTATTTGCTTTTACTCTCTACCTGGTTAATCTCAACAGCAGTCTGAACCCATTTCtctatgtgttcatgtgtgaGGATTATAAGAAGAAGCTGAAACAGTCTCTGGTGCTGGTGCTGGAGACGGCGTTTGCTGAAGATCATCTGGACAATAAAGAAATGAGACAGACACAAGATGATTAACAGGCAAAACAAACCACACTTGAATTGCTAAAAATGTAGAAAACCTTTTTGGGGGAAAAAGTTTTCCAACCATTGTTAATACAGTAATTATCACAGTTAAACAGTAACTGTCATCTGTATTCAGCATAATTTTCTGTCTAAAACATCTCTTGTaaattatagttttataaatCCAGGTTTTGTGCTTGGTTTAGTTTTGTGTTCTTGTTTCATTGTCTGTATATTCACTTAGGGCTGATTTCATTGTTTAGTTTGGTGTGTGTATTCAAGTCTCAGTCTGTCTTCATTGATGTTTGTGTCGTTGACCTGTTCATctattttattagattaaaagCATTGCTGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000154513

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00018519 lncRNA downstream 407608 37259354 ~ 37264265 (-) True XLOC_009422
TCONS_00018840 lncRNA downstream 887100 36784479 ~ 36784773 (-) True XLOC_009419
TCONS_00019218 lncRNA downstream 1168684 36500206 ~ 36503189 (-) True XLOC_009416
TCONS_00018839 lncRNA downstream 1234027 36421591 ~ 36437846 (-) True XLOC_009415
TCONS_00018510 lncRNA downstream 1302187 36365724 ~ 36369686 (-) True XLOC_009414
TCONS_00019219 lncRNA upstream 57322 37731055 ~ 37733875 (-) True XLOC_009433
TCONS_00018545 lncRNA upstream 153652 37827385 ~ 37829157 (-) True XLOC_009441
TCONS_00018553 lncRNA upstream 202983 37876716 ~ 37880887 (-) False XLOC_009444
TCONS_00018552 lncRNA upstream 202983 37876716 ~ 37880887 (-) True XLOC_009444
TCONS_00019220 lncRNA upstream 622424 38296157 ~ 38297734 (-) True XLOC_009453
TCONS_00018528 mRNA downstream 20712 37649268 ~ 37651161 (-) False XLOC_009429
TCONS_00018527 mRNA downstream 26059 37639184 ~ 37645814 (-) True XLOC_009428
TCONS_00018526 mRNA downstream 51706 37619004 ~ 37620167 (-) True XLOC_009427
TCONS_00018525 mRNA downstream 61439 37608742 ~ 37610434 (-) True XLOC_009426
TCONS_00018524 mRNA downstream 82273 37562582 ~ 37589600 (-) True XLOC_009425
TCONS_00018531 mRNA upstream 8670 37682403 ~ 37683768 (-) True XLOC_009430
TCONS_00018532 mRNA upstream 33536 37707269 ~ 37719679 (-) False XLOC_009431
TCONS_00018533 mRNA upstream 34181 37707914 ~ 37709072 (-) False XLOC_009431
TCONS_00018534 mRNA upstream 43526 37717259 ~ 37719015 (-) True XLOC_009431
TCONS_00018536 mRNA upstream 57322 37731055 ~ 37733238 (-) False XLOC_009433
TCONS_00018517 other downstream 797507 36874251 ~ 36874366 (-) True XLOC_009420
TCONS_00018513 other downstream 1138626 36529465 ~ 36533247 (-) True XLOC_009417
TCONS_00018488 other downstream 2459636 35167295 ~ 35212237 (-) True XLOC_009400
TCONS_00018481 other downstream 2559087 35095205 ~ 35112786 (-) False XLOC_009398
TCONS_00018452 other downstream 3392338 34279421 ~ 34279535 (-) True XLOC_009383
TCONS_00018535 other upstream 54101 37727834 ~ 37729166 (-) True XLOC_009432
TCONS_00018590 other upstream 2395278 40069011 ~ 40069127 (-) True XLOC_009467
TCONS_00018622 other upstream 3719668 41393401 ~ 41396073 (-) True XLOC_009478
TCONS_00018633 other upstream 3855527 41529260 ~ 41543440 (-) True XLOC_009482
TCONS_00018660 other upstream 4603940 42277673 ~ 42283815 (-) True XLOC_009502

Expression Profile

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