RNA id: TCONS_00020641


Basic Information

Item Value
RNA id TCONS_00020641
length 500
RNA type processed_transcript
GC content 0.46
exon number 4
gene id XLOC_010519
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13522299 ~ 13542460 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGAAGAAAAGAGGAAGAAACACTGGGCCCTTTTCTCCCTAGATTCACCTGTGGAAGGGAATGAGCAAGCAGACGAAAAAGAAGATAAGGAACAACCTTGTCATTGAACGTGCCTTAAGTTCTGCCCTTATTCTCCACCTCAATCAGAAGcagctttctctctctttctctctctctcttgactttaatctctgttaaacaccattctGACAAAACTTGTGGGAGTGCAGTCTGACTGGAGAGGAACGGGCGTAAGAAATCATCACAAGTATCTGCTCTGCAGGAGGAAGACGTATCTTTTAAAGCCCCCTCCACTTCTTCCTCTGCGGTCTCTTCATTATGACCTTGCTGGCGTCTGAGAGGTCACTGCTCATCCGCAATAAGTTCCGCTCAGTTCTGCAGTTGAGGATCCAGAACCGAAGACAGCAGAATGAACTTAATGCAGAGGCTGGTACAAAGGCCTCAGTTCCTGATAAAACTGGGGACAAAGAAGTCAGCAAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000144140

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022130 lncRNA downstream 41927 13440737 ~ 13480372 (-) True XLOC_010517
TCONS_00020625 lncRNA downstream 833346 12674230 ~ 12688953 (-) True XLOC_010509
TCONS_00021787 lncRNA downstream 956295 12563230 ~ 12566004 (-) True XLOC_010508
TCONS_00020622 lncRNA downstream 990272 12524732 ~ 12532027 (-) True XLOC_010507
TCONS_00020621 lncRNA downstream 1009706 12511186 ~ 12512593 (-) True XLOC_010506
TCONS_00021788 lncRNA upstream 2833 13545293 ~ 13551327 (-) True XLOC_010520
TCONS_00020643 lncRNA upstream 14461 13556921 ~ 13564275 (-) True XLOC_010521
TCONS_00020658 lncRNA upstream 315212 13857672 ~ 13860263 (-) False XLOC_010530
TCONS_00020659 lncRNA upstream 315212 13857672 ~ 13860564 (-) True XLOC_010530
TCONS_00022131 lncRNA upstream 316447 13858907 ~ 13859312 (-) True XLOC_010531
TCONS_00020640 mRNA downstream 5554 13505064 ~ 13516745 (-) True XLOC_010518
TCONS_00020639 mRNA downstream 133478 13181977 ~ 13388821 (-) True XLOC_010516
TCONS_00020638 mRNA downstream 240919 13179146 ~ 13281380 (-) False XLOC_010516
TCONS_00020637 mRNA downstream 412550 13020776 ~ 13109749 (-) True XLOC_010515
TCONS_00020636 mRNA downstream 518133 12963020 ~ 13004166 (-) True XLOC_010514
TCONS_00020644 mRNA upstream 26237 13568697 ~ 13595027 (-) True XLOC_010522
TCONS_00020645 mRNA upstream 57233 13599693 ~ 13613475 (-) False XLOC_010523
TCONS_00020646 mRNA upstream 60720 13603180 ~ 13612650 (-) True XLOC_010523
TCONS_00020647 mRNA upstream 73779 13616239 ~ 13623659 (-) False XLOC_010524
TCONS_00020648 mRNA upstream 73779 13616239 ~ 13623928 (-) False XLOC_010524
TCONS_00020613 other downstream 1027882 12474861 ~ 12494417 (-) False XLOC_010505
TCONS_00020606 other downstream 1268828 12253415 ~ 12253471 (-) True XLOC_010500
TCONS_00020605 other downstream 1271976 12250268 ~ 12250323 (-) True XLOC_010499
TCONS_00020604 other downstream 1274379 12247862 ~ 12247920 (-) True XLOC_010498
TCONS_00020603 other downstream 1282839 12239407 ~ 12239460 (-) True XLOC_010497
TCONS_00020651 other upstream 125706 13668166 ~ 13671219 (-) True XLOC_010526
TCONS_00020657 other upstream 271510 13813970 ~ 13817940 (-) True XLOC_010529
TCONS_00020665 other upstream 415296 13957756 ~ 13958885 (-) True XLOC_010535
TCONS_00020674 other upstream 842860 14385320 ~ 14396699 (-) True XLOC_010543
TCONS_00020689 other upstream 2271046 15813506 ~ 15814501 (-) True XLOC_010554

Expression Profile

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