RNA id: TCONS_00023796


Basic Information

Item Value
RNA id TCONS_00023796
length 1826
RNA type mRNA
GC content 0.49
exon number 7
gene id XLOC_012064
representative False

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 21220934 ~ 21280185 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TACAGGAGCTGAGTGACCAAGCAGGGGCAGAGTTTGATAATGCTGATGTCAGATGGGTCATCACTGTACCAGCCATCTGGAAGATGCCAGCCAAGCAGTTTATGAGAGAAGCAGCCTACAAGGCTGCTCTGGTTACTCGCGAGAATCCTGATCAGCTGATCATCGCTCTAGAACCAGAAGCTGCATCTATTTACTGCAGGAAGCTGCGCCTCCACCAAATGGTCGACCTGGGGAGCAAAACAGCCCTGAACGGTTACAGTCCGACTGACAATGCTGGGGTGGGAATGACCCAGGCTAAGGAGCATGTGCGCCGTAACCGACAGAGCCGCACCTTTCTGGTGGAGAATGTCATAGGAGAGCTCTGGTCTGAACTCGCTGAAGGTGATCGTTATGTGGTGGTGGATTGTGGAGGAGGAACAGTGGATCTCACTGTACATCAGATCCGGCTGCCGGAGGGACACTTGAAGGAGCTTTACAAAGCTTCAGGAGGTCCATATGGCTCTATTGGTATAGATTATGAATTTGAGAAGCTCCTTTGTAAGATATTCGGGCAGGATTTCATCGACCAGTTTAAGATCAAGCGTCCGGCCGCCTGGGTGGATCTGATGATTGCATTTGAATCCCGTAAAAGGGCCGCAACTCCTGACCGAAGCAATCCTCTGAATATTAACCTGCCCTTCTCTTTCATCGACTACTACAAGAAGTTCAGGGGACACAGTGTGGAGCACGCGCTGAGAAAGAGCAATGTGGACTTTGTGAAGTGGTCTTCACAGGGCATGTTGAGGATGAGCCCAGACGCGATGAATGCCCTGTTTAAACCAACTATAGACCACATTATACAGCACCTGACTGAGTTATTTGACAGGCCTGAAGTGACAGACATCAAGTTCCTCTTTCTAGTGGGTGGATTCGCAGAGTCTCCACTGCTGCAGCAGGCGGTCCAGAACATGCTTCAGGGCCGCAGCCGAATCATTATTCCGCACGACGTGGGTCTGACCATCCTGAAGGGGGCGGTGTTGTTCGGCCTGGATCCAAGCATTATAAAAGTGCGCCGCTCTCCACTCACCTACGGCGTCGGCGTCCTCAACCGATTTGTGGAAGGCAAACACCCACCTGAAAAGATGCTGGTGAAGGACGGTATGCGCTGGTGCACCGACGTCTTCGACACGTTTATCTCTGCCGATCAGTCGGTGGCGCTGGGTGAAACGGTGAAGCGCAGCTATACACCAGCCAAGCCATCGCAGCAGGTGATCGTCATCCATGTGTACTGCTCAGAAAAAGAGTCGGTCACTTTCATCACGGACCCAGGCGTGAGGAAGTGCGGCTCGCTGAAGCTGGATGTGAGCGGTACTGAGAGTCCAGCGGCACGCAGAGAGATCCAGACACTCATGCAGTTCGGAGACACCGAGATCAGAGCCATGGCTGTCGACGTGGCCACATCTCGCACTGTCAAAGCGAGCATCGATTTCCTTGGTCAGTAGATGAggaaaacacacactgcagacaaaCTCAGTATTTAGTCATGTTTTCCAGTCAAAAATCTTTAAATCATCCTCaaaacgaatatatatatatatatctttttaaaatttttattctggaaaaagtTCATTTATCCAACAAGGATACGCTGTAAAAACCGAAtcgttttttaaaatataatttataataacttttttttaaagcaggcctgtagccagaggcgttcgggtggttcaaaagacccacccctcaatgacaaagatccagaatttgctttatacatgagctcatttgttctattttgactgctacaccattatgaattgtaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-031001-1 Orthologous to human HSPA12A (heat shock protein family A (Hsp70) member 12A).

Ensembl:

ensembl_id ENSDART00000156580

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00024892 lncRNA downstream 455 21213422 ~ 21220479 (-) True XLOC_012063
TCONS_00024891 lncRNA downstream 297406 20900590 ~ 20923528 (-) False XLOC_012055
TCONS_00024890 lncRNA downstream 297406 20900590 ~ 20923528 (-) False XLOC_012055
TCONS_00024538 lncRNA downstream 302262 20900812 ~ 20918672 (-) True XLOC_012055
TCONS_00024537 lncRNA downstream 312691 20900812 ~ 20908243 (-) False XLOC_012055
TCONS_00024893 lncRNA upstream 183042 21432693 ~ 21442279 (-) True XLOC_012067
TCONS_00023812 lncRNA upstream 584083 21833734 ~ 21835452 (-) False XLOC_012072
TCONS_00023813 lncRNA upstream 589978 21839629 ~ 21842130 (-) True XLOC_012072
TCONS_00024539 lncRNA upstream 614004 21863655 ~ 21864182 (-) True XLOC_012073
TCONS_00023827 lncRNA upstream 863113 22112764 ~ 22137123 (-) True XLOC_012080
TCONS_00023794 mRNA downstream 20528 21154576 ~ 21200406 (-) False XLOC_012062
TCONS_00023795 mRNA downstream 58113 21158383 ~ 21162821 (-) True XLOC_012062
TCONS_00023791 mRNA downstream 154829 21063403 ~ 21066105 (-) False XLOC_012060
TCONS_00023792 mRNA downstream 154859 21063404 ~ 21066075 (-) True XLOC_012060
TCONS_00023789 mRNA downstream 163260 21051022 ~ 21057674 (-) False XLOC_012059
TCONS_00023802 mRNA upstream 61750 21311401 ~ 21368775 (-) True XLOC_012065
TCONS_00023803 mRNA upstream 122640 21372291 ~ 21418340 (-) True XLOC_012066
TCONS_00023804 mRNA upstream 183042 21432693 ~ 21441464 (-) False XLOC_012067
TCONS_00023805 mRNA upstream 357588 21607239 ~ 21617618 (-) True XLOC_012068
TCONS_00023806 mRNA upstream 532392 21782043 ~ 21784152 (-) True XLOC_012069
TCONS_00023793 other downstream 90557 21130261 ~ 21130377 (-) True XLOC_012061
TCONS_00023786 other downstream 241982 20966835 ~ 20978952 (-) True XLOC_012057
TCONS_00023778 other downstream 517637 20703179 ~ 20703297 (-) True XLOC_012054
TCONS_00023774 other downstream 555008 20659871 ~ 20665926 (-) True XLOC_012050
TCONS_00023754 other downstream 1077018 20122026 ~ 20143916 (-) True XLOC_012040
TCONS_00023801 other upstream 30222 21279873 ~ 21280185 (-) True XLOC_012064
TCONS_00023811 other upstream 584073 21833724 ~ 21859164 (-) False XLOC_012072
TCONS_00023820 other upstream 753206 22002857 ~ 22010668 (-) False XLOC_012077
TCONS_00023839 other upstream 1536523 22786174 ~ 22786291 (-) True XLOC_012087
TCONS_00023840 other upstream 1675558 22925209 ~ 22925337 (-) True XLOC_012088

Expression Profile

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