Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU303427 |
| length | 285 |
| lncRNA type | antisense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G267031 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 48934753 ~ 48935482 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU303327 | lncRNA | upstream | 154251 | 48777515 ~ 48780502 (+) | True | G266941 |
| TU303324 | lncRNA | upstream | 159810 | 48774578 ~ 48774943 (+) | True | G266938 |
| TU303204 | lncRNA | upstream | 267638 | 48651133 ~ 48667115 (+) | True | LOC110520080 |
| TU303212 | lncRNA | upstream | 373569 | 48560970 ~ 48561184 (+) | True | G266831 |
| TU303198 | lncRNA | upstream | 382482 | 48551932 ~ 48552271 (+) | True | G266822 |
| TU303466 | lncRNA | downstream | 51168 | 48986650 ~ 48986852 (+) | True | G267069 |
| TU303598 | lncRNA | downstream | 268580 | 49204062 ~ 49204683 (+) | True | G267190 |
| TU303517 | lncRNA | downstream | 270396 | 49205878 ~ 49206112 (+) | True | myo3b |
| TU303623 | lncRNA | downstream | 313951 | 49249433 ~ 49249614 (+) | True | G267215 |
| TU303622 | lncRNA | downstream | 315301 | 49250783 ~ 49251132 (+) | True | G267214 |
| NM_001165081.2 | mRNA | upstream | 36266 | 48891589 ~ 48898487 (+) | True | rdh3 |
| XM_021581815.2 | mRNA | upstream | 36801 | 48891513 ~ 48897952 (+) | False | rdh3 |
| XM_036974375.1 | mRNA | upstream | 58510 | 48872108 ~ 48876243 (+) | True | LOC110520084 |
| XM_021597122.2 | mRNA | upstream | 77708 | 48826435 ~ 48857045 (+) | True | LOC110520083 |
| XM_021597115.2 | mRNA | upstream | 139481 | 48672040 ~ 48795272 (+) | True | LOC110520081 |
| XM_021597124.2 | mRNA | downstream | 59715 | 48995197 ~ 49035203 (+) | True | LOC110520086 |
| XM_021597125.2 | mRNA | downstream | 107852 | 49043334 ~ 49046003 (+) | True | LOC110520088 |
| XM_021597127.2 | mRNA | downstream | 116902 | 49052384 ~ 49057523 (+) | False | LOC110520090 |
| XM_036974383.1 | mRNA | downstream | 116950 | 49052432 ~ 49057523 (+) | True | LOC110520090 |
| XM_021597128.2 | mRNA | downstream | 127003 | 49062485 ~ 49070285 (+) | True | LOC110520091 |
| TU300304 | other | upstream | 2102509 | 46831008 ~ 46832244 (+) | False | LOC110520046 |
| TU300305 | other | upstream | 2102549 | 46831008 ~ 46832204 (+) | True | LOC110520046 |
| TU300303 | other | upstream | 2102619 | 46831008 ~ 46832134 (+) | False | LOC110520046 |
| TU299995 | other | upstream | 2749949 | 46184134 ~ 46184804 (+) | True | G263859 |
| TU299866 | other | upstream | 2855328 | 46075484 ~ 46079425 (+) | True | G263733 |
| TU303780 | other | downstream | 575321 | 49510803 ~ 49512475 (+) | True | G267358 |
| TU303803 | other | downstream | 619016 | 49554498 ~ 49555838 (+) | True | G267381 |
| TU303972 | other | downstream | 901135 | 49836617 ~ 49855502 (+) | True | G267529 |
| TU305367 | other | downstream | 1226819 | 50162301 ~ 50183026 (+) | True | hoxd3a |
| TU305730 | other | downstream | 1666820 | 50602302 ~ 50604816 (+) | True | LOC110520146 |
