Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU564703 |
| length | 603 |
| lncRNA type | sense_over |
| GC content | 0.53 |
| exon number | 3 |
| gene id | setbp1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 32320495 ~ 32378525 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU564745 | lncRNA | downstream | 39666 | 32326682 ~ 32326966 (-) | True | G497075 |
| TU564701 | lncRNA | downstream | 42118 | 32320565 ~ 32324514 (-) | False | setbp1 |
| TU564720 | lncRNA | downstream | 78828 | 32287511 ~ 32287804 (-) | True | G497050 |
| TU564702 | lncRNA | downstream | 116119 | 32246193 ~ 32250513 (-) | True | G497032 |
| TU564689 | lncRNA | downstream | 138239 | 32227029 ~ 32228393 (-) | True | G497021 |
| TU564783 | lncRNA | upstream | 9843 | 32388216 ~ 32388472 (-) | True | G497112 |
| TU564787 | lncRNA | upstream | 11167 | 32389540 ~ 32389761 (-) | True | G497116 |
| TU565135 | lncRNA | upstream | 32217 | 32410590 ~ 32410895 (-) | True | G497427 |
| TU565136 | lncRNA | upstream | 32564 | 32410937 ~ 32411181 (-) | True | G497428 |
| TU565121 | lncRNA | upstream | 130314 | 32508687 ~ 32516502 (-) | True | LOC110526888 |
| XM_021606200.2 | mRNA | downstream | 92485 | 32260346 ~ 32274147 (-) | True | slc14a2 |
| XM_021606199.2 | mRNA | downstream | 92498 | 32260346 ~ 32274134 (-) | False | slc14a2 |
| XM_021604983.2 | mRNA | downstream | 285866 | 32074123 ~ 32080766 (-) | True | LOC110525023 |
| XM_036979909.1 | mRNA | downstream | 294785 | 32049187 ~ 32071847 (-) | False | epg5 |
| XM_021606203.2 | mRNA | upstream | 90939 | 32469312 ~ 32482950 (-) | True | thbs4a |
| XM_036979929.1 | mRNA | upstream | 130307 | 32508680 ~ 32520900 (-) | False | LOC110526888 |
| XM_021606209.2 | mRNA | upstream | 301664 | 32680037 ~ 32682898 (-) | False | LOC110525784 |
| XM_021606208.2 | mRNA | upstream | 301664 | 32680037 ~ 32682899 (-) | False | LOC110525784 |
| XM_036979932.1 | mRNA | upstream | 312334 | 32690707 ~ 32713153 (-) | False | LOC110525785 |
| TU564492 | other | downstream | 473983 | 31843463 ~ 31892649 (-) | True | G496851 |
| TU564405 | other | downstream | 694705 | 31670978 ~ 31671927 (-) | True | G496777 |
| TU564400 | other | downstream | 705014 | 31661393 ~ 31661618 (-) | True | G496772 |
| TU563022 | other | downstream | 1791059 | 30575118 ~ 30575573 (-) | True | G495560 |
| TU563013 | other | downstream | 1817182 | 30545402 ~ 30549450 (-) | True | G495554 |
| TU565305 | other | upstream | 301669 | 32680042 ~ 32682847 (-) | True | LOC110525784 |
| TU566350 | other | upstream | 949134 | 33327507 ~ 33330504 (-) | True | G498484 |
| TU566347 | other | upstream | 954277 | 33332650 ~ 33336780 (-) | True | LOC110525812 |
| TU566881 | other | upstream | 1661986 | 34040359 ~ 34041174 (-) | True | G498960 |
| TU569190 | other | upstream | 3386993 | 35765366 ~ 35767929 (-) | True | G501142 |
