RNA id: TCONS_00032186


Basic Information

Item Value
RNA id TCONS_00032186
length 117
RNA type rRNA
GC content 0.46
exon number 1
gene id XLOC_016343
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 22897285 ~ 22897401 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GACTATTGTCATATCACTCTGCAGCCTAAGAccggttacttactgaagctaagcaggactaagcctggtcagtacctgcatgggagaccacataggaaaactaGGTAGCTGTTGAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000178806

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033820 lncRNA downstream 28565 22857105 ~ 22868720 (-) True XLOC_016341
TCONS_00033819 lncRNA downstream 45580 22845662 ~ 22851705 (-) True XLOC_016340
TCONS_00033818 lncRNA downstream 134830 22758806 ~ 22762455 (-) True XLOC_016339
TCONS_00033817 lncRNA downstream 169854 22707739 ~ 22727431 (-) True XLOC_016338
TCONS_00032183 lncRNA downstream 210627 22682860 ~ 22686658 (-) True XLOC_016337
TCONS_00032193 lncRNA upstream 76785 22974186 ~ 22979578 (-) False XLOC_016345
TCONS_00032195 lncRNA upstream 88855 22986256 ~ 22987491 (-) False XLOC_016345
TCONS_00033821 lncRNA upstream 127844 23025245 ~ 23026907 (-) False XLOC_016346
TCONS_00033822 lncRNA upstream 127844 23025245 ~ 23027062 (-) True XLOC_016346
TCONS_00032201 lncRNA upstream 187238 23084639 ~ 23087324 (-) True XLOC_016347
TCONS_00032182 mRNA downstream 208634 22677015 ~ 22688651 (-) False XLOC_016337
TCONS_00032179 mRNA downstream 237053 22652981 ~ 22660232 (-) False XLOC_016336
TCONS_00032180 mRNA downstream 237835 22653123 ~ 22659450 (-) True XLOC_016336
TCONS_00032177 mRNA downstream 260564 22617675 ~ 22636721 (-) False XLOC_016335
TCONS_00032178 mRNA downstream 265787 22617936 ~ 22631498 (-) True XLOC_016335
TCONS_00032189 mRNA upstream 33758 22931159 ~ 22966127 (-) False XLOC_016344
TCONS_00032188 mRNA upstream 33758 22931159 ~ 22966127 (-) False XLOC_016344
TCONS_00032187 mRNA upstream 33758 22931159 ~ 22966127 (-) False XLOC_016344
TCONS_00032190 mRNA upstream 34954 22932355 ~ 22966076 (-) False XLOC_016344
TCONS_00032191 mRNA upstream 67730 22965131 ~ 22966097 (-) True XLOC_016344
TCONS_00032172 other downstream 462739 22434430 ~ 22434546 (-) True XLOC_016331
TCONS_00032140 other downstream 2139586 20757582 ~ 20757699 (-) True XLOC_016303
TCONS_00032138 other downstream 2192762 20702226 ~ 20704523 (-) False XLOC_016302
TCONS_00032139 other downstream 2192762 20702706 ~ 20704523 (-) True XLOC_016302
TCONS_00032137 other downstream 2194549 20701088 ~ 20702736 (-) False XLOC_016302
TCONS_00032199 other upstream 96620 22994021 ~ 23001370 (-) False XLOC_016345
TCONS_00032238 other upstream 1363816 24261217 ~ 24261296 (-) True XLOC_016372
TCONS_00032244 other upstream 1381438 24278839 ~ 24280795 (-) False XLOC_016373
TCONS_00032251 other upstream 1414366 24311767 ~ 24317208 (-) False XLOC_016374
TCONS_00032254 other upstream 1416344 24313745 ~ 24317205 (-) False XLOC_016374