RNA id: TCONS_00032172


Basic Information

Item Value
RNA id TCONS_00032172
length 117
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_016331
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 22434430 ~ 22434546 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tatagccatatcaccctgcagcccaagaccgggtACTCGCCACTGAAGTtaggcagggctgagcctggtcagtacctgaatgggagaccacatggacaagctaggttgcagctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120633

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033816 lncRNA downstream 25241 22389790 ~ 22409189 (-) True XLOC_016330
TCONS_00033815 lncRNA downstream 25252 22389790 ~ 22409178 (-) False XLOC_016330
TCONS_00033367 lncRNA downstream 70997 22353582 ~ 22363433 (-) True XLOC_016329
TCONS_00033814 lncRNA downstream 86146 22340854 ~ 22348284 (-) True XLOC_016328
TCONS_00033365 lncRNA downstream 119367 22313751 ~ 22315063 (-) False XLOC_016327
TCONS_00032181 lncRNA upstream 242197 22676743 ~ 22677851 (-) False XLOC_016337
TCONS_00032183 lncRNA upstream 248314 22682860 ~ 22686658 (-) True XLOC_016337
TCONS_00033817 lncRNA upstream 273193 22707739 ~ 22727431 (-) True XLOC_016338
TCONS_00033818 lncRNA upstream 324260 22758806 ~ 22762455 (-) True XLOC_016339
TCONS_00033819 lncRNA upstream 411116 22845662 ~ 22851705 (-) True XLOC_016340
TCONS_00032171 mRNA downstream 70970 22353422 ~ 22363460 (-) False XLOC_016329
TCONS_00032170 mRNA downstream 147602 22208406 ~ 22286828 (-) False XLOC_016325
TCONS_00032169 mRNA downstream 204104 22208404 ~ 22230326 (-) False XLOC_016325
TCONS_00032168 mRNA downstream 281633 22150134 ~ 22152797 (-) True XLOC_016324
TCONS_00032166 mRNA downstream 586495 21821683 ~ 21847935 (-) False XLOC_016323
TCONS_00032173 mRNA upstream 45528 22480074 ~ 22492289 (-) True XLOC_016332
TCONS_00032174 mRNA upstream 71818 22506364 ~ 22530969 (-) True XLOC_016333
TCONS_00032175 mRNA upstream 130382 22564928 ~ 22575851 (-) False XLOC_016334
TCONS_00032176 mRNA upstream 131536 22566082 ~ 22569488 (-) True XLOC_016334
TCONS_00032177 mRNA upstream 183129 22617675 ~ 22636721 (-) False XLOC_016335
TCONS_00032140 other downstream 1676731 20757582 ~ 20757699 (-) True XLOC_016303
TCONS_00032138 other downstream 1729907 20702226 ~ 20704523 (-) False XLOC_016302
TCONS_00032139 other downstream 1729907 20702706 ~ 20704523 (-) True XLOC_016302
TCONS_00032137 other downstream 1731694 20701088 ~ 20702736 (-) False XLOC_016302
TCONS_00032136 other downstream 1732567 20699481 ~ 20701863 (-) False XLOC_016302
TCONS_00032186 other upstream 462739 22897285 ~ 22897401 (-) True XLOC_016343
TCONS_00032199 other upstream 559475 22994021 ~ 23001370 (-) False XLOC_016345
TCONS_00032238 other upstream 1826671 24261217 ~ 24261296 (-) True XLOC_016372
TCONS_00032244 other upstream 1844293 24278839 ~ 24280795 (-) False XLOC_016373
TCONS_00032251 other upstream 1877221 24311767 ~ 24317208 (-) False XLOC_016374