RNA id: TCONS_00032136


Basic Information

Item Value
RNA id TCONS_00032136
length 804
RNA type processed_transcript
GC content 0.35
exon number 3
gene id XLOC_016302
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 20699481 ~ 20704523 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gtgacggctacggcgaagggctatgcgtcagcgccatagcatacgccggcgtttgacgcagaagtataaatcagccttaagtcaagaaccaaatgaaGCACCAGAGTACAGATTATGGAGGTATCTGAAGTTGAACTAACTGGAAGCAGGGAACCATACTAATAAAGTTCCTTAagcagGTTCCTTGTAAAGATTAACCCAGGGAAGGATCGAAAGTGGAGAAGACCAGATCAAGAAAGACTACATCAAGATCTGCGGTCAGTTCAAAGGATGTTTTGCATTGGACTGTTTTTTTTGGCTTTGACCCTTGCTTGCCCCTGACCTCACTCTTGGACTGCCCTGTtggattttcagtttatttaattaaaaaaaaaaatttttggttatgggtagatgctaataaatatttaattgtaattatttaatgtaaatcaaaggcggcaacaccaaggctccaaaaatacaaatttattaaattaaaaaggctgacacagagcgtaaAATGTTTCGAGccgccggctcttcatcagacaaatAATTTTtcgttgtaattttttaaataatatgtttttgttaaatatgcgatttctgtgtttgttctgtctacTCGAACTTGTTTATCTGGTTTCTgtaattatcatttgtttatttgacccttGCCTCGCCTCTGATCTTGTTTTTGGATTGCCCTTCatatatctttttaattattGGTTCTAGTTATatggttataaaatatttgttaatttaattaatatgcattatattaaaaaatacatataaatatattttctgtgttttttt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000137961

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033361 lncRNA downstream 236558 20453614 ~ 20462923 (-) False XLOC_016298
TCONS_00033362 lncRNA downstream 236572 20456287 ~ 20462909 (-) True XLOC_016298
TCONS_00033363 lncRNA downstream 240472 20457947 ~ 20459009 (-) True XLOC_016299
TCONS_00033803 lncRNA downstream 551112 20144257 ~ 20148369 (-) False XLOC_016295
TCONS_00033801 lncRNA downstream 551123 20124994 ~ 20148358 (-) False XLOC_016295
TCONS_00032145 lncRNA upstream 217308 20919171 ~ 20920335 (-) True XLOC_016307
TCONS_00033804 lncRNA upstream 420325 21122188 ~ 21124115 (-) True XLOC_016311
TCONS_00032151 lncRNA upstream 463942 21165805 ~ 21166754 (-) True XLOC_016312
TCONS_00033805 lncRNA upstream 493665 21195528 ~ 21197037 (-) False XLOC_016313
TCONS_00033806 lncRNA upstream 493665 21195528 ~ 21208559 (-) False XLOC_016313
TCONS_00032131 mRNA downstream 32480 20658259 ~ 20667001 (-) False XLOC_016301
TCONS_00032133 mRNA downstream 32517 20661303 ~ 20666964 (-) False XLOC_016301
TCONS_00032132 mRNA downstream 32534 20660864 ~ 20666947 (-) False XLOC_016301
TCONS_00032134 mRNA downstream 32561 20661373 ~ 20666920 (-) False XLOC_016301
TCONS_00032129 mRNA downstream 100166 20555394 ~ 20599315 (-) False XLOC_016300
TCONS_00032141 mRNA upstream 61426 20763289 ~ 20788698 (-) True XLOC_016304
TCONS_00032142 mRNA upstream 109814 20811677 ~ 20866758 (-) True XLOC_016305
TCONS_00032143 mRNA upstream 181091 20882954 ~ 20890429 (-) True XLOC_016306
TCONS_00032144 mRNA upstream 214634 20916497 ~ 20923864 (-) False XLOC_016307
TCONS_00032146 mRNA upstream 278299 20980162 ~ 20981907 (-) True XLOC_016308
TCONS_00032124 other downstream 553656 20145741 ~ 20145825 (-) False XLOC_016295
TCONS_00032120 other downstream 1064390 19634994 ~ 19635091 (-) True XLOC_016293
TCONS_00032117 other downstream 1119802 19579582 ~ 19579679 (-) True XLOC_016290
TCONS_00032113 other downstream 1140310 19539680 ~ 19559171 (-) True XLOC_016287
TCONS_00032112 other downstream 1175798 19523586 ~ 19523683 (-) True XLOC_016286
TCONS_00032138 other upstream 363 20702226 ~ 20704523 (-) False XLOC_016302
TCONS_00032139 other upstream 843 20702706 ~ 20704523 (-) True XLOC_016302
TCONS_00032140 other upstream 55719 20757582 ~ 20757699 (-) True XLOC_016303
TCONS_00032172 other upstream 1732567 22434430 ~ 22434546 (-) True XLOC_016331
TCONS_00032186 other upstream 2195422 22897285 ~ 22897401 (-) True XLOC_016343

Expression Profile

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