RNA id: TCONS_00032120


Basic Information

Item Value
RNA id TCONS_00032120
length 98
RNA type miRNA
GC content 0.63
exon number 1
gene id XLOC_016293
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 19634994 ~ 19635091 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

caggttctCTGGCTTGACGTCTCGGTGCAGGACGCggcggctctcgcagtgtttcagcgccgcgatcagctgcaccagcactttcttggccagaGGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190460

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00032118 lncRNA downstream 13350 19601696 ~ 19621644 (-) True XLOC_016292
TCONS_00033360 lncRNA downstream 39933 19592454 ~ 19595061 (-) True XLOC_016291
TCONS_00032114 lncRNA downstream 69721 19560092 ~ 19565273 (-) True XLOC_016288
TCONS_00033800 lncRNA downstream 252672 19379111 ~ 19382322 (-) True XLOC_016283
TCONS_00032104 lncRNA downstream 365697 19252270 ~ 19269297 (-) True XLOC_016280
TCONS_00033801 lncRNA upstream 489903 20124994 ~ 20148358 (-) False XLOC_016295
TCONS_00033802 lncRNA upstream 509166 20144257 ~ 20148003 (-) False XLOC_016295
TCONS_00033803 lncRNA upstream 509166 20144257 ~ 20148369 (-) False XLOC_016295
TCONS_00032125 lncRNA upstream 511048 20146139 ~ 20148035 (-) True XLOC_016295
TCONS_00033361 lncRNA upstream 818523 20453614 ~ 20462923 (-) False XLOC_016298
TCONS_00032116 mRNA downstream 4697 19574650 ~ 19630297 (-) False XLOC_016289
TCONS_00032119 mRNA downstream 4697 19628134 ~ 19630297 (-) True XLOC_016289
TCONS_00032115 mRNA downstream 58354 19574496 ~ 19576640 (-) False XLOC_016289
TCONS_00032111 mRNA downstream 114304 19518676 ~ 19520690 (-) True XLOC_016285
TCONS_00032110 mRNA downstream 114670 19518520 ~ 19520324 (-) False XLOC_016285
TCONS_00032122 mRNA upstream 189099 19824190 ~ 20120904 (-) False XLOC_016294
TCONS_00032121 mRNA upstream 189099 19824190 ~ 20120904 (-) False XLOC_016294
TCONS_00032123 mRNA upstream 190208 19825299 ~ 20052561 (-) True XLOC_016294
TCONS_00032126 mRNA upstream 627388 20262479 ~ 20323901 (-) True XLOC_016296
TCONS_00032127 mRNA upstream 809386 20444477 ~ 20470125 (-) False XLOC_016297
TCONS_00032117 other downstream 55315 19579582 ~ 19579679 (-) True XLOC_016290
TCONS_00032113 other downstream 75823 19539680 ~ 19559171 (-) True XLOC_016287
TCONS_00032112 other downstream 111311 19523586 ~ 19523683 (-) True XLOC_016286
TCONS_00032108 other downstream 121698 19506311 ~ 19513296 (-) False XLOC_016284
TCONS_00032109 other downstream 122350 19508100 ~ 19512644 (-) True XLOC_016284
TCONS_00032124 other upstream 510650 20145741 ~ 20145825 (-) False XLOC_016295
TCONS_00032136 other upstream 1064390 20699481 ~ 20701863 (-) False XLOC_016302
TCONS_00032137 other upstream 1065997 20701088 ~ 20702736 (-) False XLOC_016302
TCONS_00032138 other upstream 1067135 20702226 ~ 20704523 (-) False XLOC_016302
TCONS_00032139 other upstream 1067615 20702706 ~ 20704523 (-) True XLOC_016302