Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00032570 |
| length | 856 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | XLOC_016547 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 34128738 ~ 34138400 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0000775 | chromosome, centromeric region | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005694 | chromosome | cellular_component |
| id | description |
|---|---|
| ko03036 | Chromosome and associated proteins |
| id | description |
|---|---|
| ZDB-GENE-040930-6 | Predicted to be located in chromosome, centromeric region and nucleus. Orthologous to human CENPL (centromere protein L). |
| ensembl_id | ENSDART00000133381 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033380 | lncRNA | downstream | 21263 | 34106830 ~ 34107985 (-) | True | XLOC_016546 |
| TCONS_00033379 | lncRNA | downstream | 202469 | 33925174 ~ 33926779 (-) | True | XLOC_016543 |
| TCONS_00033879 | lncRNA | downstream | 202557 | 33843402 ~ 33926691 (-) | False | XLOC_016543 |
| TCONS_00033878 | lncRNA | downstream | 344058 | 33784726 ~ 33785190 (-) | True | XLOC_016542 |
| TCONS_00033378 | lncRNA | downstream | 344114 | 33782659 ~ 33785134 (-) | False | XLOC_016542 |
| TCONS_00033381 | lncRNA | upstream | 1477331 | 35615395 ~ 35616087 (-) | False | XLOC_016552 |
| TCONS_00032579 | lncRNA | upstream | 1477331 | 35615395 ~ 35621867 (-) | True | XLOC_016552 |
| TCONS_00033880 | lncRNA | upstream | 1590525 | 35728589 ~ 35733227 (-) | False | XLOC_016553 |
| TCONS_00032580 | lncRNA | upstream | 1590525 | 35728589 ~ 35733752 (-) | True | XLOC_016553 |
| TCONS_00033881 | lncRNA | upstream | 1938132 | 36076196 ~ 36078638 (-) | True | XLOC_016555 |
| TCONS_00032566 | mRNA | downstream | 57030 | 34008798 ~ 34072218 (-) | False | XLOC_016545 |
| TCONS_00032568 | mRNA | downstream | 57196 | 34047489 ~ 34072052 (-) | True | XLOC_016545 |
| TCONS_00032567 | mRNA | downstream | 57230 | 34008955 ~ 34072018 (-) | False | XLOC_016545 |
| TCONS_00032564 | mRNA | downstream | 135612 | 33969212 ~ 33993636 (-) | False | XLOC_016544 |
| TCONS_00032565 | mRNA | downstream | 135715 | 33969667 ~ 33993533 (-) | True | XLOC_016544 |
| TCONS_00032571 | mRNA | upstream | 79579 | 34217643 ~ 34218528 (-) | True | XLOC_016548 |
| TCONS_00032572 | mRNA | upstream | 242918 | 34380982 ~ 34483597 (-) | False | XLOC_016549 |
| TCONS_00032573 | mRNA | upstream | 242918 | 34380982 ~ 34555945 (-) | True | XLOC_016549 |
| TCONS_00032574 | mRNA | upstream | 848137 | 34986201 ~ 35103069 (-) | True | XLOC_016550 |
| TCONS_00032575 | mRNA | upstream | 1371354 | 35509418 ~ 35566938 (-) | False | XLOC_016551 |
| TCONS_00032562 | other | downstream | 559209 | 33569922 ~ 33570039 (-) | True | XLOC_016540 |
| TCONS_00032557 | other | downstream | 674049 | 33422411 ~ 33455199 (-) | False | XLOC_016538 |
| TCONS_00032550 | other | downstream | 1442840 | 32682201 ~ 32686408 (-) | True | XLOC_016530 |
| TCONS_00032544 | other | downstream | 1461983 | 32667132 ~ 32667265 (-) | True | XLOC_016529 |
| TCONS_00032543 | other | downstream | 1462789 | 32666324 ~ 32666459 (-) | True | XLOC_016528 |
| TCONS_00032578 | other | upstream | 1374007 | 35512071 ~ 35512876 (-) | True | XLOC_016551 |
| TCONS_00032582 | other | upstream | 2049116 | 36187180 ~ 36187673 (-) | True | XLOC_016556 |
| TCONS_00032583 | other | upstream | 2051522 | 36189586 ~ 36189919 (-) | True | XLOC_016557 |
| TCONS_00032584 | other | upstream | 2052743 | 36190807 ~ 36191279 (-) | True | XLOC_016558 |
| TCONS_00032585 | other | upstream | 2055282 | 36193346 ~ 36193896 (-) | True | XLOC_016559 |
