RNA id: TCONS_00032957


Basic Information

Item Value
RNA id TCONS_00032957
length 386
RNA type processed_transcript
GC content 0.31
exon number 2
gene id XLOC_016822
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 47345041 ~ 47348782 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gcaggcaacggctctcctaatttgaaattcacctgtcgtctttcatccagcgaattcatcctcgcacaacactgagatgaaggcgaagtcaccatgaaaagttaaacgtttaccgttaaggtaagctctggtcttcacataagttagtcattatgactaagctatcattatggtaaatttttttcaactgtaagttagttatttaaactaaactcataatgaaatgagtcttaactgttttattaaatggagctgaaaattaaatgcagtttaattattttaagctaacgttaatattaacaaaatacatattaattgtctatttctcaataatgttaatgagcttgatttatagtgtgtcattaattgtacatttaatttttggt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000134175

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033939 lncRNA downstream 3262 47341771 ~ 47344826 (-) True XLOC_016821
TCONS_00033407 lncRNA downstream 248427 47090745 ~ 47099661 (-) True XLOC_016819
TCONS_00033406 lncRNA downstream 482526 46863035 ~ 46865562 (-) True XLOC_016817
TCONS_00033938 lncRNA downstream 1313977 46019361 ~ 46034111 (-) True XLOC_016816
TCONS_00033937 lncRNA downstream 1791424 45556180 ~ 45556664 (-) True XLOC_016811
TCONS_00033941 lncRNA upstream 8545 47357321 ~ 47367152 (-) False XLOC_016823
TCONS_00033940 lncRNA upstream 8545 47357321 ~ 47367152 (-) True XLOC_016823
TCONS_00033942 lncRNA upstream 637671 47986447 ~ 47988542 (-) False XLOC_016834
TCONS_00033943 lncRNA upstream 637671 47986447 ~ 47988542 (-) False XLOC_016834
TCONS_00032970 lncRNA upstream 637671 47986447 ~ 47988542 (-) False XLOC_016834
TCONS_00032946 mRNA downstream 308326 47038403 ~ 47039762 (-) True XLOC_016818
TCONS_00032944 mRNA downstream 1656960 45666146 ~ 45691128 (-) True XLOC_016814
TCONS_00032938 mRNA downstream 1684143 45655294 ~ 45663945 (-) False XLOC_016813
TCONS_00032937 mRNA downstream 1717265 45629707 ~ 45630823 (-) True XLOC_016812
TCONS_00032935 mRNA downstream 1843290 45502295 ~ 45504798 (-) False XLOC_016810
TCONS_00032958 mRNA upstream 21547 47370323 ~ 47431205 (-) False XLOC_016824
TCONS_00032959 mRNA upstream 30490 47379266 ~ 47431205 (-) True XLOC_016824
TCONS_00032962 mRNA upstream 238462 47587238 ~ 47620806 (-) True XLOC_016827
TCONS_00032963 mRNA upstream 295265 47644041 ~ 47681454 (-) True XLOC_016828
TCONS_00032965 mRNA upstream 521031 47869807 ~ 47870649 (-) True XLOC_016830
TCONS_00032953 other downstream 66 47346866 ~ 47348022 (-) False XLOC_016822
TCONS_00032950 other downstream 171 47345204 ~ 47347917 (-) False XLOC_016822
TCONS_00032948 other downstream 791 47345041 ~ 47347297 (-) False XLOC_016822
TCONS_00032947 other downstream 87335 47260637 ~ 47260753 (-) True XLOC_016820
TCONS_00032945 other downstream 1603109 45744863 ~ 45744979 (-) True XLOC_016815
TCONS_00032960 other upstream 83311 47432087 ~ 47464836 (-) True XLOC_016825
TCONS_00032961 other upstream 192961 47541737 ~ 47545639 (-) True XLOC_016826
TCONS_00032964 other upstream 504193 47852969 ~ 47853084 (-) True XLOC_016829
TCONS_00032976 other upstream 796313 48145089 ~ 48157237 (-) True XLOC_016835
TCONS_00032983 other upstream 1056496 48405272 ~ 48406205 (-) True XLOC_016843