Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00033942 |
| length | 1049 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | XLOC_016834 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 47986447 ~ 48010815 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006030 | chitin metabolic process | biological_process |
| GO:0006032 | chitin catabolic process | biological_process |
| GO:0008152 | metabolic process | biological_process |
| GO:0042737 | drug catabolic process | biological_process |
| GO:1901564 | organonitrogen compound metabolic process | biological_process |
| GO:0009056 | catabolic process | biological_process |
| GO:0046348 | amino sugar catabolic process | biological_process |
| GO:1901072 | glucosamine-containing compound catabolic process | biological_process |
| GO:0017144 | drug metabolic process | biological_process |
| GO:0044248 | cellular catabolic process | biological_process |
| GO:0009410 | response to xenobiotic stimulus | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0071704 | organic substance metabolic process | biological_process |
| GO:0071466 | cellular response to xenobiotic stimulus | biological_process |
| GO:0019432 | triglyceride biosynthetic process | biological_process |
| GO:0006572 | tyrosine catabolic process | biological_process |
| GO:0006026 | aminoglycan catabolic process | biological_process |
| GO:0044421 | obsolete extracellular region part | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0008395 | steroid hydroxylase activity | molecular_function |
| GO:0004175 | endopeptidase activity | molecular_function |
| GO:0004180 | carboxypeptidase activity | molecular_function |
| GO:0004181 | metallocarboxypeptidase activity | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0004568 | chitinase activity | molecular_function |
| GO:0046914 | transition metal ion binding | molecular_function |
| GO:0071916 | dipeptide transmembrane transporter activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008235 | metalloexopeptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| GO:0008237 | metallopeptidase activity | molecular_function |
| GO:0008238 | exopeptidase activity | molecular_function |
| GO:0140096 | catalytic activity, acting on a protein | molecular_function |
| GO:0017171 | serine hydrolase activity | molecular_function |
| GO:0043169 | cation binding | molecular_function |
| GO:0008061 | chitin binding | molecular_function |
| GO:0003824 | catalytic activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033941 | lncRNA | downstream | 619295 | 47357321 ~ 47367152 (-) | False | XLOC_016823 |
| TCONS_00033940 | lncRNA | downstream | 619295 | 47357321 ~ 47367152 (-) | True | XLOC_016823 |
| TCONS_00033939 | lncRNA | downstream | 641621 | 47341771 ~ 47344826 (-) | True | XLOC_016821 |
| TCONS_00033407 | lncRNA | downstream | 886786 | 47090745 ~ 47099661 (-) | True | XLOC_016819 |
| TCONS_00033406 | lncRNA | downstream | 1120885 | 46863035 ~ 46865562 (-) | True | XLOC_016817 |
| TCONS_00032975 | lncRNA | upstream | 153780 | 48142322 ~ 48145290 (-) | False | XLOC_016835 |
| TCONS_00033946 | lncRNA | upstream | 153780 | 48142322 ~ 48157237 (-) | False | XLOC_016835 |
| TCONS_00033947 | lncRNA | upstream | 274889 | 48263431 ~ 48265811 (-) | True | XLOC_016838 |
| TCONS_00033409 | lncRNA | upstream | 278802 | 48267344 ~ 48275543 (-) | False | XLOC_016839 |
| TCONS_00033408 | lncRNA | upstream | 278802 | 48267344 ~ 48275543 (-) | True | XLOC_016839 |
| TCONS_00032969 | mRNA | downstream | 28774 | 47955160 ~ 47957673 (-) | True | XLOC_016833 |
| TCONS_00032968 | mRNA | downstream | 62644 | 47916204 ~ 47923803 (-) | True | XLOC_016832 |
| TCONS_00032966 | mRNA | downstream | 82357 | 47900506 ~ 47904090 (-) | False | XLOC_016831 |
| TCONS_00032967 | mRNA | downstream | 82404 | 47903284 ~ 47904043 (-) | True | XLOC_016831 |
| TCONS_00032965 | mRNA | downstream | 115798 | 47869807 ~ 47870649 (-) | True | XLOC_016830 |
| TCONS_00032972 | mRNA | upstream | 130952 | 48119494 ~ 48171441 (-) | False | XLOC_016835 |
| TCONS_00032973 | mRNA | upstream | 133144 | 48121686 ~ 48171112 (-) | False | XLOC_016835 |
| TCONS_00032974 | mRNA | upstream | 139024 | 48127566 ~ 48153945 (-) | False | XLOC_016835 |
| TCONS_00032977 | mRNA | upstream | 194062 | 48182604 ~ 48196092 (-) | True | XLOC_016836 |
| TCONS_00032978 | mRNA | upstream | 214736 | 48203278 ~ 48255843 (-) | True | XLOC_016837 |
| TCONS_00032964 | other | downstream | 133363 | 47852969 ~ 47853084 (-) | True | XLOC_016829 |
| TCONS_00032961 | other | downstream | 440808 | 47541737 ~ 47545639 (-) | True | XLOC_016826 |
| TCONS_00032960 | other | downstream | 521611 | 47432087 ~ 47464836 (-) | True | XLOC_016825 |
| TCONS_00032951 | other | downstream | 637665 | 47345209 ~ 47348782 (-) | False | XLOC_016822 |
| TCONS_00032957 | other | downstream | 637671 | 47348088 ~ 47348776 (-) | True | XLOC_016822 |
| TCONS_00032976 | other | upstream | 156547 | 48145089 ~ 48157237 (-) | True | XLOC_016835 |
| TCONS_00032983 | other | upstream | 416730 | 48405272 ~ 48406205 (-) | True | XLOC_016843 |
| TCONS_00032991 | other | upstream | 576288 | 48564830 ~ 48564946 (-) | True | XLOC_016852 |
| TCONS_00032992 | other | upstream | 758141 | 48746683 ~ 48746812 (-) | True | XLOC_016857 |
| TCONS_00033002 | other | upstream | 1678214 | 49666756 ~ 49667049 (-) | True | XLOC_016868 |
