RNA id: TCONS_00032964


Basic Information

Item Value
RNA id TCONS_00032964
length 116
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_016829
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 47852969 ~ 47853084 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

taccAAAGCCATATCACTCTGCAGCCAAGACCGgttgctcactgaagctaagcagggcagagcctggtcagtacctggatgggagaccacttgggaacactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119363

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033941 lncRNA downstream 485817 47357321 ~ 47367152 (-) False XLOC_016823
TCONS_00033940 lncRNA downstream 485817 47357321 ~ 47367152 (-) True XLOC_016823
TCONS_00033939 lncRNA downstream 508143 47341771 ~ 47344826 (-) True XLOC_016821
TCONS_00033407 lncRNA downstream 753308 47090745 ~ 47099661 (-) True XLOC_016819
TCONS_00033406 lncRNA downstream 987407 46863035 ~ 46865562 (-) True XLOC_016817
TCONS_00033942 lncRNA upstream 133363 47986447 ~ 47988542 (-) False XLOC_016834
TCONS_00033943 lncRNA upstream 133363 47986447 ~ 47988542 (-) False XLOC_016834
TCONS_00032970 lncRNA upstream 133363 47986447 ~ 47988542 (-) False XLOC_016834
TCONS_00033944 lncRNA upstream 133363 47986447 ~ 47988598 (-) False XLOC_016834
TCONS_00033945 lncRNA upstream 133363 47986447 ~ 48010815 (-) False XLOC_016834
TCONS_00032963 mRNA downstream 171515 47644041 ~ 47681454 (-) True XLOC_016828
TCONS_00032962 mRNA downstream 232163 47587238 ~ 47620806 (-) True XLOC_016827
TCONS_00032958 mRNA downstream 421764 47370323 ~ 47431205 (-) False XLOC_016824
TCONS_00032959 mRNA downstream 421764 47379266 ~ 47431205 (-) True XLOC_016824
TCONS_00032946 mRNA downstream 813207 47038403 ~ 47039762 (-) True XLOC_016818
TCONS_00032965 mRNA upstream 16723 47869807 ~ 47870649 (-) True XLOC_016830
TCONS_00032966 mRNA upstream 47422 47900506 ~ 47904090 (-) False XLOC_016831
TCONS_00032967 mRNA upstream 50200 47903284 ~ 47904043 (-) True XLOC_016831
TCONS_00032968 mRNA upstream 63120 47916204 ~ 47923803 (-) True XLOC_016832
TCONS_00032969 mRNA upstream 102076 47955160 ~ 47957673 (-) True XLOC_016833
TCONS_00032961 other downstream 307330 47541737 ~ 47545639 (-) True XLOC_016826
TCONS_00032960 other downstream 388133 47432087 ~ 47464836 (-) True XLOC_016825
TCONS_00032957 other downstream 504193 47348088 ~ 47348776 (-) True XLOC_016822
TCONS_00032955 other downstream 504198 47347109 ~ 47348771 (-) False XLOC_016822
TCONS_00032956 other downstream 504198 47347177 ~ 47348771 (-) False XLOC_016822
TCONS_00032976 other upstream 292005 48145089 ~ 48157237 (-) True XLOC_016835
TCONS_00032983 other upstream 552188 48405272 ~ 48406205 (-) True XLOC_016843
TCONS_00032991 other upstream 711746 48564830 ~ 48564946 (-) True XLOC_016852
TCONS_00032992 other upstream 893599 48746683 ~ 48746812 (-) True XLOC_016857
TCONS_00033002 other upstream 1813672 49666756 ~ 49667049 (-) True XLOC_016868

Expression Profile

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