RNA id: TCONS_00035183


Basic Information

Item Value
RNA id TCONS_00035183
length 293
RNA type mRNA
GC content 0.51
exon number 2
gene id XLOC_017802
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 803108 ~ 805245 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CGATATTTGAGATGGAAAAGCATCGCATCAAGAGGTCCGAGTTCTTCCACTCAGAGGTGAAAGTCTGCCCACAGGAGACAATGAGAGAGGTCATAGCAAGCCATCAATCATACTACACACTGAGAGTTTGCCAGGAGGCTGTATGGGAGGCTTTCCGCATCTTTCTGGACCGAATTCCCACCAGCTCAGAGTACCAGAAATGGGTTCACACGTGCCAGCACGACTCCCTGTGCATCTCAGACCTCGCCAGGAATTTCAGCCAGTCACAGGAACACATCGACATGGTCTACAGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000131825

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036780 lncRNA downstream 269032 530511 ~ 534076 (-) False XLOC_017799
TCONS_00036781 lncRNA downstream 269044 531290 ~ 534064 (-) False XLOC_017799
TCONS_00036782 lncRNA downstream 269066 531502 ~ 534042 (-) True XLOC_017799
TCONS_00035176 lncRNA downstream 370812 430001 ~ 432296 (-) True XLOC_017796
TCONS_00036779 lncRNA downstream 391189 408561 ~ 411919 (-) True XLOC_017795
TCONS_00035187 lncRNA upstream 77206 882451 ~ 885360 (-) True XLOC_017803
TCONS_00035196 lncRNA upstream 392834 1198079 ~ 1198709 (-) True XLOC_017809
TCONS_00035212 lncRNA upstream 648905 1454150 ~ 1463535 (-) True XLOC_017815
TCONS_00036440 lncRNA upstream 830387 1635632 ~ 1725104 (-) True XLOC_017816
TCONS_00036441 lncRNA upstream 939980 1745225 ~ 1763478 (-) True XLOC_017817
TCONS_00035182 mRNA downstream 11320 778608 ~ 791788 (-) True XLOC_017801
TCONS_00035180 mRNA downstream 161597 616114 ~ 641511 (-) False XLOC_017800
TCONS_00035181 mRNA downstream 172471 616753 ~ 630637 (-) True XLOC_017800
TCONS_00035179 mRNA downstream 315325 484256 ~ 487783 (-) True XLOC_017798
TCONS_00035178 mRNA downstream 339322 442616 ~ 463786 (-) True XLOC_017797
TCONS_00035185 mRNA upstream 46338 851583 ~ 894374 (-) False XLOC_017803
TCONS_00035184 mRNA upstream 46338 851583 ~ 894374 (-) False XLOC_017803
TCONS_00035186 mRNA upstream 56574 861819 ~ 874807 (-) False XLOC_017803
TCONS_00035188 mRNA upstream 97167 902412 ~ 909953 (-) False XLOC_017804
TCONS_00035189 mRNA upstream 97167 902412 ~ 915234 (-) True XLOC_017804
TCONS_00035199 other upstream 424543 1229788 ~ 1239603 (-) True XLOC_017810
TCONS_00035230 other upstream 1884303 2689548 ~ 2708120 (-) False XLOC_017830
TCONS_00035232 other upstream 1910704 2715949 ~ 2725519 (-) False XLOC_017831
TCONS_00035252 other upstream 2517359 3322604 ~ 3322820 (-) True XLOC_017842
TCONS_00035253 other upstream 2518321 3323566 ~ 3323782 (-) True XLOC_017843

Expression Profile

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