Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00035189 |
| length | 1900 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 3 |
| gene id | XLOC_017804 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 902412 ~ 915234 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007189 | adenylate cyclase-activating G protein-coupled receptor signaling pathway | biological_process |
| GO:0019222 | regulation of metabolic process | biological_process |
| GO:2000253 | positive regulation of feeding behavior | biological_process |
| GO:0038171 | cannabinoid signaling pathway | biological_process |
| GO:0001889 | liver development | biological_process |
| GO:0008610 | lipid biosynthetic process | biological_process |
| GO:0007409 | axonogenesis | biological_process |
| GO:0007413 | axonal fasciculation | biological_process |
| GO:0006555 | methionine metabolic process | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004949 | cannabinoid receptor activity | molecular_function |
| id | description |
|---|---|
| ko04015 | Rap1 signaling pathway |
| ko04080 | Neuroactive ligand-receptor interaction |
| ko04723 | Retrograde endocannabinoid signaling |
| ko04714 | Thermogenesis |
| ko04030 | G protein-coupled receptors |
| id | description |
|---|---|
| ZDB-GENE-040312-3 | Predicted to enable cannabinoid receptor activity. Acts upstream of or within several processes, including axon development; methionine metabolic process; and positive regulation of feeding behavior. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in central nervous system; cranial ganglion; digestive system; head; and oocyte. Human ortholog(s) of this gene implicated in obesity; schizophrenia; and type 2 diabetes mellitus. Orthologous to human CNR1 (cannabinoid receptor 1). |
| ensembl_id | ENSDART00000164816 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00035187 | lncRNA | downstream | 17052 | 882451 ~ 885360 (-) | True | XLOC_017803 |
| TCONS_00036780 | lncRNA | downstream | 368336 | 530511 ~ 534076 (-) | False | XLOC_017799 |
| TCONS_00036781 | lncRNA | downstream | 368348 | 531290 ~ 534064 (-) | False | XLOC_017799 |
| TCONS_00036782 | lncRNA | downstream | 368370 | 531502 ~ 534042 (-) | True | XLOC_017799 |
| TCONS_00035176 | lncRNA | downstream | 470116 | 430001 ~ 432296 (-) | True | XLOC_017796 |
| TCONS_00035196 | lncRNA | upstream | 282845 | 1198079 ~ 1198709 (-) | True | XLOC_017809 |
| TCONS_00035212 | lncRNA | upstream | 538916 | 1454150 ~ 1463535 (-) | True | XLOC_017815 |
| TCONS_00036440 | lncRNA | upstream | 720398 | 1635632 ~ 1725104 (-) | True | XLOC_017816 |
| TCONS_00036441 | lncRNA | upstream | 829991 | 1745225 ~ 1763478 (-) | True | XLOC_017817 |
| TCONS_00036783 | lncRNA | upstream | 1143704 | 2058938 ~ 2065432 (-) | False | XLOC_017819 |
| TCONS_00035185 | mRNA | downstream | 8038 | 851583 ~ 894374 (-) | False | XLOC_017803 |
| TCONS_00035184 | mRNA | downstream | 8038 | 851583 ~ 894374 (-) | False | XLOC_017803 |
| TCONS_00035186 | mRNA | downstream | 27605 | 861819 ~ 874807 (-) | False | XLOC_017803 |
| TCONS_00035183 | mRNA | downstream | 97167 | 803108 ~ 805245 (-) | True | XLOC_017802 |
| TCONS_00035182 | mRNA | downstream | 110624 | 778608 ~ 791788 (-) | True | XLOC_017801 |
| TCONS_00035190 | mRNA | upstream | 28645 | 943879 ~ 1120056 (-) | True | XLOC_017805 |
| TCONS_00035191 | mRNA | upstream | 216858 | 1132092 ~ 1151265 (-) | False | XLOC_017806 |
| TCONS_00035192 | mRNA | upstream | 217345 | 1132579 ~ 1141722 (-) | True | XLOC_017806 |
| TCONS_00035193 | mRNA | upstream | 243159 | 1158393 ~ 1174266 (-) | False | XLOC_017807 |
| TCONS_00035194 | mRNA | upstream | 243501 | 1158735 ~ 1176631 (-) | True | XLOC_017807 |
| TCONS_00035199 | other | upstream | 314554 | 1229788 ~ 1239603 (-) | True | XLOC_017810 |
| TCONS_00035230 | other | upstream | 1774314 | 2689548 ~ 2708120 (-) | False | XLOC_017830 |
| TCONS_00035232 | other | upstream | 1800715 | 2715949 ~ 2725519 (-) | False | XLOC_017831 |
| TCONS_00035252 | other | upstream | 2407370 | 3322604 ~ 3322820 (-) | True | XLOC_017842 |
| TCONS_00035253 | other | upstream | 2408332 | 3323566 ~ 3323782 (-) | True | XLOC_017843 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000325_00474459_00476885.mRNA | True | 2018 | mRNA | 0.49 | 2 | CI01000325 | 474055 ~ 476885 (-) |
