RNA id: TU759368



Basic Information


Item Value
RNA id TU759368
length 304
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G666850
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 3823904 ~ 3824682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTATTATCTAACATGGGCTCATTGAGTATTATCTAACATGGGCTCATTCAGTATTATCTAACATGGGCTCATTGAGTATTATCTAACATGGGCTCATTGAGTATTATCTGACATGGGCTCATTCAGTATTATCTAACATGGGCTCATTGAGTATTATCTGACATGGGCTCATTGAGTATTATCTGACATGGGCTCATTGAGTATTATCTGACATGGGCTCATTCAGTATTATCTGACATGGGCTCATTCAGTATTATCTGACATGGGCTCATTGAGTATTATCTGACATGGGCTCATTGAGTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU759334 lncRNA downstream 53741 3769311 ~ 3770163 (-) True G666821
TU759326 lncRNA downstream 71374 3751929 ~ 3752530 (-) True G666815
TU759323 lncRNA downstream 81332 3742099 ~ 3742572 (-) True G666812
TU759322 lncRNA downstream 81653 3741865 ~ 3742251 (-) True G666811
TU759314 lncRNA downstream 92199 3729034 ~ 3731705 (-) True G666808
TU759370 lncRNA upstream 3083 3827765 ~ 3828018 (-) True G666852
TU759371 lncRNA upstream 3754 3828436 ~ 3828716 (-) True G666853
TU759396 lncRNA upstream 46295 3870977 ~ 3871269 (-) True G666874
TU759397 lncRNA upstream 47137 3871819 ~ 3872049 (-) True G666875
TU759399 lncRNA upstream 48483 3873165 ~ 3875130 (-) True G666876
XM_036984577.1 mRNA downstream 587 3713777 ~ 3823317 (-) False LOC118965483
XM_036984578.1 mRNA downstream 587 3713777 ~ 3823317 (-) True LOC118965483
XM_036984568.1 mRNA downstream 703460 3081212 ~ 3120444 (-) True ccm2
XM_036984569.1 mRNA downstream 720558 3081212 ~ 3103346 (-) False ccm2
XM_036984571.1 mRNA downstream 866629 2947015 ~ 2957275 (-) True LOC110529255
XM_036984580.1 mRNA upstream 55151 3879833 ~ 3959350 (-) False LOC110529264
XM_036984582.1 mRNA upstream 55151 3879833 ~ 3959350 (-) False LOC110529264
XM_036984583.1 mRNA upstream 55151 3879833 ~ 3959350 (-) True LOC110529264
XM_036984585.1 mRNA upstream 152650 3977332 ~ 3990108 (-) True LOC110529266
XM_036984586.1 mRNA upstream 212934 4037616 ~ 4047801 (-) True baalcb
TU758186 other downstream 153757 3668232 ~ 3670147 (-) True G665927
TU758017 other downstream 302281 3520790 ~ 3521623 (-) True G665797
TU757924 other downstream 405616 3417113 ~ 3418288 (-) True G665718
TU757859 other downstream 482944 3340056 ~ 3340960 (-) True G665655
TU757795 other downstream 583852 3236888 ~ 3240052 (-) True G665603
TU759716 other upstream 664124 4488806 ~ 4490220 (-) True G667122
TU760267 other upstream 1724121 5548803 ~ 5551245 (-) True znf395b
TU761008 other upstream 2381876 6206558 ~ 6284021 (-) True G668192
TU761057 other upstream 2455514 6280196 ~ 6281640 (-) True G668238
TU761993 other upstream 2961850 6786532 ~ 6794187 (-) True wdr21

Expression Profile