Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040033 |
| length | 1251 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | XLOC_020080 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 4947923 ~ 4957762 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-091204-443 | Orthologous to human C19orf44 (chromosome 19 open reading frame 44). |
| ensembl_id | ENSDART00000135639 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00041863 | lncRNA | upstream | 260204 | 4680238 ~ 4687719 (+) | True | XLOC_020078 |
| TCONS_00042023 | lncRNA | upstream | 780813 | 4064601 ~ 4167110 (+) | False | XLOC_020072 |
| TCONS_00041862 | lncRNA | upstream | 794142 | 4148883 ~ 4153781 (+) | True | XLOC_020072 |
| TCONS_00042022 | lncRNA | upstream | 848324 | 4064601 ~ 4099599 (+) | False | XLOC_020072 |
| TCONS_00041864 | lncRNA | downstream | 8679 | 4966441 ~ 4969159 (+) | True | XLOC_020081 |
| TCONS_00042024 | lncRNA | downstream | 145011 | 5102773 ~ 5103817 (+) | False | XLOC_020082 |
| TCONS_00041865 | lncRNA | downstream | 160551 | 5118313 ~ 5122556 (+) | False | XLOC_020083 |
| TCONS_00040038 | lncRNA | downstream | 160616 | 5118378 ~ 5119948 (+) | False | XLOC_020083 |
| TCONS_00042025 | lncRNA | downstream | 160616 | 5118378 ~ 5122556 (+) | False | XLOC_020083 |
| TCONS_00040032 | mRNA | upstream | 214817 | 4707663 ~ 4733106 (+) | True | XLOC_020079 |
| TCONS_00040029 | mRNA | upstream | 433266 | 4488454 ~ 4514657 (+) | False | XLOC_020076 |
| TCONS_00040030 | mRNA | upstream | 433490 | 4513607 ~ 4514433 (+) | True | XLOC_020076 |
| TCONS_00040027 | mRNA | upstream | 481199 | 4447387 ~ 4466724 (+) | False | XLOC_020075 |
| TCONS_00040028 | mRNA | upstream | 484435 | 4447431 ~ 4463488 (+) | True | XLOC_020075 |
| TCONS_00040034 | mRNA | downstream | 145587 | 5103349 ~ 5115637 (+) | False | XLOC_020082 |
| TCONS_00040035 | mRNA | downstream | 148989 | 5106751 ~ 5116624 (+) | True | XLOC_020082 |
| TCONS_00040036 | mRNA | downstream | 160599 | 5118361 ~ 5122557 (+) | False | XLOC_020083 |
| TCONS_00040037 | mRNA | downstream | 160608 | 5118370 ~ 5122072 (+) | False | XLOC_020083 |
| TCONS_00040039 | mRNA | downstream | 160644 | 5118406 ~ 5121460 (+) | False | XLOC_020083 |
| TCONS_00040031 | other | upstream | 269942 | 4677867 ~ 4677981 (+) | True | XLOC_020077 |
| TCONS_00040022 | other | upstream | 1187052 | 3760757 ~ 3760871 (+) | True | XLOC_020070 |
| TCONS_00040021 | other | upstream | 1559919 | 3384732 ~ 3388004 (+) | True | XLOC_020069 |
| TCONS_00040020 | other | upstream | 1571653 | 3375262 ~ 3376270 (+) | True | XLOC_020068 |
| TCONS_00040015 | other | upstream | 1715289 | 3231612 ~ 3232634 (+) | True | XLOC_020062 |
| TCONS_00040044 | other | downstream | 168136 | 5125898 ~ 5130024 (+) | True | XLOC_020084 |
| TCONS_00040049 | other | downstream | 335451 | 5293213 ~ 5293301 (+) | True | XLOC_020087 |
| TCONS_00040050 | other | downstream | 342189 | 5299951 ~ 5300056 (+) | True | XLOC_020089 |
| TCONS_00040051 | other | downstream | 349723 | 5307485 ~ 5307574 (+) | True | XLOC_020090 |
| TCONS_00040065 | other | downstream | 853115 | 5810877 ~ 5812454 (+) | True | XLOC_020101 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000030_11059372_11062362.mRNA | True | 1996 | mRNA | 0.48 | 8 | CI01000030 | 11059280 ~ 11062577 (-) |
