Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040926 |
| length | 1047 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 6 |
| gene id | XLOC_020751 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 3910610 ~ 3914222 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-140820-1 | Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in asthma; hepatitis C; and occupational asthma. Orthologous to several human genes including HLA-E (major histocompatibility complex, class I, E); HLA-F (major histocompatibility complex, class I, F); and HLA-G (major histocompatibility complex, class I, G). |
| ensembl_id | ENSDART00000187174 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042299 | lncRNA | downstream | 24047 | 3883607 ~ 3886684 (-) | True | XLOC_020750 |
| TCONS_00042298 | lncRNA | downstream | 169447 | 3740586 ~ 3741284 (-) | True | XLOC_020749 |
| TCONS_00042297 | lncRNA | downstream | 562847 | 3347513 ~ 3347884 (-) | True | XLOC_020747 |
| TCONS_00040911 | lncRNA | downstream | 758585 | 3147100 ~ 3152146 (-) | True | XLOC_020742 |
| TCONS_00042296 | lncRNA | downstream | 1018185 | 2889663 ~ 2892546 (-) | True | XLOC_020738 |
| TCONS_00042300 | lncRNA | upstream | 818845 | 4733007 ~ 4735337 (-) | True | XLOC_020756 |
| TCONS_00042301 | lncRNA | upstream | 830945 | 4745107 ~ 4746442 (-) | True | XLOC_020758 |
| TCONS_00042302 | lncRNA | upstream | 868145 | 4782307 ~ 4783024 (-) | False | XLOC_020761 |
| TCONS_00042303 | lncRNA | upstream | 905250 | 4819412 ~ 4820146 (-) | False | XLOC_020764 |
| TCONS_00042304 | lncRNA | upstream | 938900 | 4853062 ~ 4853815 (-) | True | XLOC_020765 |
| TCONS_00040922 | mRNA | downstream | 315292 | 3389910 ~ 3595439 (-) | False | XLOC_020748 |
| TCONS_00040921 | mRNA | downstream | 346168 | 3389347 ~ 3564563 (-) | False | XLOC_020748 |
| TCONS_00040923 | mRNA | downstream | 461449 | 3447924 ~ 3449282 (-) | False | XLOC_020748 |
| TCONS_00040920 | mRNA | downstream | 566118 | 3336723 ~ 3344613 (-) | True | XLOC_020746 |
| TCONS_00040918 | mRNA | downstream | 611631 | 3263428 ~ 3299100 (-) | False | XLOC_020745 |
| TCONS_00040931 | mRNA | upstream | 399443 | 4313605 ~ 4398069 (-) | False | XLOC_020753 |
| TCONS_00040932 | mRNA | upstream | 401094 | 4315256 ~ 4407871 (-) | True | XLOC_020753 |
| TCONS_00040933 | mRNA | upstream | 494481 | 4408643 ~ 4439311 (-) | True | XLOC_020754 |
| TCONS_00040934 | mRNA | upstream | 610205 | 4524367 ~ 4644484 (-) | False | XLOC_020755 |
| TCONS_00040935 | mRNA | upstream | 680303 | 4594465 ~ 4649238 (-) | True | XLOC_020755 |
| TCONS_00040924 | other | downstream | 230006 | 3595268 ~ 3680725 (-) | True | XLOC_020748 |
| TCONS_00040899 | other | downstream | 2680709 | 1229906 ~ 1230022 (-) | True | XLOC_020689 |
| TCONS_00040895 | other | downstream | 2750982 | 1158069 ~ 1159749 (-) | False | XLOC_020686 |
| TCONS_00040885 | other | downstream | 3093324 | 812920 ~ 817407 (-) | True | XLOC_020678 |
| TCONS_00040857 | other | downstream | 3563317 | 344918 ~ 347414 (-) | False | XLOC_020658 |
| TCONS_00040930 | other | upstream | 397641 | 4311803 ~ 4313118 (-) | True | XLOC_020752 |
| TCONS_00040947 | other | upstream | 905248 | 4819410 ~ 4899294 (-) | False | XLOC_020764 |
| TCONS_00040949 | other | upstream | 913794 | 4827956 ~ 4899294 (-) | False | XLOC_020764 |
| TCONS_00040955 | other | upstream | 984424 | 4898586 ~ 4899116 (-) | True | XLOC_020764 |
| TCONS_00040987 | other | upstream | 1795841 | 5710003 ~ 5713793 (-) | False | XLOC_020792 |
