RNA id: TCONS_00004119


Basic Information

Item Value
RNA id TCONS_00004119
length 567
RNA type mRNA
GC content 0.41
exon number 4
gene id XLOC_002124
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 23502026 ~ 23505767 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGAGAAAGTACAGGGCAGCCACAGTGTGTTTGGTGCTGCTGTGTTTTCTTCTGCTGGCTGCTGTCACGGTGCTGAGTGTGATGTTCACTCTAGACAGACAACAACTGATATCCATGAATGAGAATCTGACTAGAGAGAGTGATCAGctaaaattggagaaaaataatCTTCAGAAGAATCTTAGTAAAATGGATGGATGGATTTTCTATCAGTCCAGTTTTTACTTAATTTCAGCTGTGCAGAAGGGCTGGAATGAGAGCAGAAAAGACTGTAAAGACAGAGGAACAGATCTGTTGATTTTGAACAACCGAGAAGAACAAAATTTTTTAAGGACCTATTTTGCTGTCACAGACTTCTGGATTGGTCTGACTGACCAAGAAGTAGAAGATAAATGGATATGGGTTGATGGTAGCAGCCCGTCCTTTGGGTTCAACAACTGGCAATCTGGAGAACCTAATAGCAATGCAGGAAATGAGGACTGTGCTAAAGTTAATCCTGGGGGATGGGCTGATTACCCATGTGGTAGTACTTTTAAATGGATCTGTGAAagacatatttttatttag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000031356

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005892 lncRNA upstream 286147 23141296 ~ 23215879 (+) True XLOC_002121
TCONS_00004113 lncRNA upstream 462736 23034329 ~ 23039290 (+) True XLOC_002119
TCONS_00005891 lncRNA upstream 536600 22960289 ~ 22965426 (+) True XLOC_002117
TCONS_00004111 lncRNA upstream 545656 22938231 ~ 22956370 (+) False XLOC_002116
TCONS_00005708 lncRNA downstream 36850 23542617 ~ 23544066 (+) True XLOC_002128
TCONS_00005893 lncRNA downstream 82908 23588675 ~ 23591058 (+) True XLOC_002131
TCONS_00005894 lncRNA downstream 477540 23983307 ~ 23992917 (+) False XLOC_002132
TCONS_00005709 lncRNA downstream 484866 23990633 ~ 23992917 (+) False XLOC_002132
TCONS_00005710 lncRNA downstream 590472 24096239 ~ 24096470 (+) True XLOC_002134
TCONS_00004118 mRNA upstream 58952 23441488 ~ 23443074 (+) True XLOC_002123
TCONS_00004115 mRNA upstream 358922 23099365 ~ 23143104 (+) False XLOC_002121
TCONS_00004116 mRNA upstream 363166 23099890 ~ 23138860 (+) False XLOC_002121
TCONS_00004114 mRNA upstream 432703 23060391 ~ 23069323 (+) True XLOC_002120
TCONS_00004112 mRNA upstream 475497 23022263 ~ 23026529 (+) True XLOC_002118
TCONS_00004120 mRNA downstream 6049 23511816 ~ 23519898 (+) True XLOC_002125
TCONS_00004121 mRNA downstream 15185 23520952 ~ 23523315 (+) True XLOC_002126
TCONS_00004122 mRNA downstream 31809 23537576 ~ 23541888 (+) True XLOC_002127
TCONS_00004123 mRNA downstream 42907 23548674 ~ 23550956 (+) True XLOC_002129
TCONS_00004124 mRNA downstream 47766 23553533 ~ 23559544 (+) True XLOC_002130
TCONS_00004117 other upstream 84079 23417833 ~ 23417947 (+) True XLOC_002122
TCONS_00004107 other upstream 595106 22891183 ~ 22906920 (+) True XLOC_002113
TCONS_00004103 other upstream 654622 22847272 ~ 22847404 (+) True XLOC_002111
TCONS_00004086 other upstream 1465779 22035161 ~ 22036247 (+) False XLOC_002097
TCONS_00004078 other upstream 1521361 21980547 ~ 21980665 (+) True XLOC_002095
TCONS_00004125 other downstream 486614 23992381 ~ 23992699 (+) True XLOC_002132
TCONS_00004130 other downstream 847983 24353750 ~ 24353866 (+) True XLOC_002137
TCONS_00004134 other downstream 916464 24422231 ~ 24442358 (+) False XLOC_002140
TCONS_00004135 other downstream 921162 24426929 ~ 24435439 (+) False XLOC_002140
TCONS_00004147 other downstream 1154375 24660142 ~ 24664449 (+) False XLOC_002143