RNA id: TCONS_00044337


Basic Information

Item Value
RNA id TCONS_00044337
length 708
RNA type processed_transcript
GC content 0.50
exon number 6
gene id XLOC_022476
representative False

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 31901350 ~ 31913289 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GAGTTTACCTGCACGGGAAGCGTGAGACGGCGAGGAGAGTTGAGCGGAATGCAGCTGATTTGATCCCTCTGGTCACGTGGAGAAGTTTGGTGCAGTGTCTGTGTGTTGTTAGTTCATCCGTCAGCAGAAATCCAGCGtgcaaaatatacacacacacagtcaatgtCTCTGCTGGAGGACATCGTTGACCTGCTGAAATGTGTTCTGGAATATTTTGGAGTGCCTCCAGACATGTTGGTTCCAGTATGGGAAAGTACACACTGTGGACAGTACCGAAGCCTAGTCCGAATGATTGGAACAAATCTTCCTCTTTCTCCTTACCCTCGGTTGCGGTTTCAGATTCCTCTGCAGACCTTTAATAAGCACAGCCATATCGATGTGTCAGTGGACTCTCCAGCCATTCCTACTTTAGCGGATGTGCTTTGGCTGGTCGAGGATGAAGGAGACAGTCACACAAAATTCAGGAATGCTGTCCCACTGAGGAAAAAGTGTGTACCTCACGGTTATGAGACTCCCTCATTGGGGTCCGTGTCTGTAAAAGCTCAGAGAGGCGGAGGGGTCCTGGCACAGAGCACTCAGCCTGATGCCCTCCTGAAGATCTCTGCTCTGGAGGAGGAACTTCAGAGACTTCGAGCACAGATTGCTACCATAATCACAGCTCCAGCAGCTCCTGTCCTCACTTCAACTCCTGTCtgtcctcctcctcca

Function

GO:

id name namespace
GO:0009060 aerobic respiration biological_process
GO:0000266 mitochondrial fission biological_process
GO:0005739 mitochondrion cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061013-398 Predicted to be involved in aerobic respiration and mitochondrial fission. Predicted to be active in mitochondrion. Is expressed in several structures, including immature eye; nervous system; neural plate; pectoral fin musculature; and segmental plate. Orthologous to human MTFR2 (mitochondrial fission regulator 2).

Ensembl:

ensembl_id ENSDART00000147688

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044325 lncRNA downstream 261263 31644332 ~ 31645735 (-) False XLOC_022471
TCONS_00044312 lncRNA downstream 478303 31427675 ~ 31428695 (-) True XLOC_022467
TCONS_00045034 lncRNA downstream 483476 31420811 ~ 31423522 (-) True XLOC_022466
TCONS_00045033 lncRNA downstream 503290 31401932 ~ 31403708 (-) True XLOC_022465
TCONS_00044302 lncRNA downstream 612816 31293552 ~ 31294182 (-) False XLOC_022462
TCONS_00045035 lncRNA upstream 93663 32006905 ~ 32007796 (-) True XLOC_022480
TCONS_00044345 lncRNA upstream 180706 32093948 ~ 32100014 (-) True XLOC_022481
TCONS_00045036 lncRNA upstream 198076 32111318 ~ 32141320 (-) False XLOC_022482
TCONS_00045037 lncRNA upstream 206448 32119690 ~ 32141307 (-) True XLOC_022482
TCONS_00045038 lncRNA upstream 249192 32162434 ~ 32163181 (-) True XLOC_022485
TCONS_00044331 mRNA downstream 96607 31764061 ~ 31810391 (-) False XLOC_022475
TCONS_00044330 mRNA downstream 96607 31764061 ~ 31810391 (-) False XLOC_022475
TCONS_00044332 mRNA downstream 96770 31768417 ~ 31810228 (-) False XLOC_022475
TCONS_00044333 mRNA downstream 96776 31802842 ~ 31810222 (-) False XLOC_022475
TCONS_00044328 mRNA downstream 143245 31752604 ~ 31763753 (-) True XLOC_022473
TCONS_00044339 mRNA upstream 7598 31920840 ~ 31932076 (-) True XLOC_022477
TCONS_00044340 mRNA upstream 49141 31962383 ~ 31969786 (-) False XLOC_022478
TCONS_00044341 mRNA upstream 49142 31962384 ~ 31967554 (-) True XLOC_022478
TCONS_00044342 mRNA upstream 59142 31972384 ~ 31974060 (-) True XLOC_022479
TCONS_00044343 mRNA upstream 165804 32079046 ~ 32092443 (-) False XLOC_022481
TCONS_00044334 other downstream 102638 31803082 ~ 31804360 (-) True XLOC_022475
TCONS_00044329 other downstream 152130 31754752 ~ 31754868 (-) True XLOC_022474
TCONS_00044327 other downstream 189288 31693368 ~ 31717710 (-) True XLOC_022472
TCONS_00044322 other downstream 258982 31641122 ~ 31648016 (-) False XLOC_022471
TCONS_00044303 other downstream 561504 31339453 ~ 31345494 (-) True XLOC_022462
TCONS_00044348 other upstream 226601 32139843 ~ 32139958 (-) True XLOC_022484
TCONS_00044359 other upstream 412725 32325967 ~ 32334114 (-) True XLOC_022488
TCONS_00044367 other upstream 962304 32875546 ~ 32875660 (-) True XLOC_022497
TCONS_00044368 other upstream 1305763 33219005 ~ 33219128 (-) True XLOC_022498
TCONS_00044369 other upstream 1388062 33301304 ~ 33301419 (-) True XLOC_022500

Expression Profile

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