Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00044346 |
| length | 1171 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 1 |
| gene id | XLOC_022483 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 32128399 ~ 32129614 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040718-123 | Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain; midbrain; and retinal ganglion cell layer. |
| ensembl_id | ENSDART00000167761 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044345 | lncRNA | downstream | 28385 | 32093948 ~ 32100014 (-) | True | XLOC_022481 |
| TCONS_00045035 | lncRNA | downstream | 120603 | 32006905 ~ 32007796 (-) | True | XLOC_022480 |
| TCONS_00044325 | lncRNA | downstream | 482664 | 31644332 ~ 31645735 (-) | False | XLOC_022471 |
| TCONS_00044312 | lncRNA | downstream | 699704 | 31427675 ~ 31428695 (-) | True | XLOC_022467 |
| TCONS_00045034 | lncRNA | downstream | 704877 | 31420811 ~ 31423522 (-) | True | XLOC_022466 |
| TCONS_00045038 | lncRNA | upstream | 32865 | 32162434 ~ 32163181 (-) | True | XLOC_022485 |
| TCONS_00045039 | lncRNA | upstream | 218430 | 32347999 ~ 32352704 (-) | True | XLOC_022489 |
| TCONS_00045040 | lncRNA | upstream | 279209 | 32408778 ~ 32417158 (-) | False | XLOC_022492 |
| TCONS_00045041 | lncRNA | upstream | 279209 | 32408778 ~ 32557718 (-) | False | XLOC_022492 |
| TCONS_00045042 | lncRNA | upstream | 329286 | 32458855 ~ 32461920 (-) | True | XLOC_022493 |
| TCONS_00044344 | mRNA | downstream | 28293 | 32087902 ~ 32100106 (-) | False | XLOC_022481 |
| TCONS_00044343 | mRNA | downstream | 35956 | 32079046 ~ 32092443 (-) | False | XLOC_022481 |
| TCONS_00044342 | mRNA | downstream | 154339 | 31972384 ~ 31974060 (-) | True | XLOC_022479 |
| TCONS_00044340 | mRNA | downstream | 158613 | 31962383 ~ 31969786 (-) | False | XLOC_022478 |
| TCONS_00044341 | mRNA | downstream | 160845 | 31962384 ~ 31967554 (-) | True | XLOC_022478 |
| TCONS_00044350 | mRNA | upstream | 19700 | 32149269 ~ 32194397 (-) | False | XLOC_022485 |
| TCONS_00044349 | mRNA | upstream | 19700 | 32149269 ~ 32194397 (-) | False | XLOC_022485 |
| TCONS_00044351 | mRNA | upstream | 21764 | 32151333 ~ 32157865 (-) | False | XLOC_022485 |
| TCONS_00044352 | mRNA | upstream | 22882 | 32152451 ~ 32156278 (-) | False | XLOC_022485 |
| TCONS_00044353 | mRNA | upstream | 26218 | 32155787 ~ 32162810 (-) | False | XLOC_022485 |
| TCONS_00044337 | other | downstream | 215157 | 31906998 ~ 31913242 (-) | False | XLOC_022476 |
| TCONS_00044334 | other | downstream | 324039 | 31803082 ~ 31804360 (-) | True | XLOC_022475 |
| TCONS_00044329 | other | downstream | 373531 | 31754752 ~ 31754868 (-) | True | XLOC_022474 |
| TCONS_00044327 | other | downstream | 410689 | 31693368 ~ 31717710 (-) | True | XLOC_022472 |
| TCONS_00044322 | other | downstream | 480383 | 31641122 ~ 31648016 (-) | False | XLOC_022471 |
| TCONS_00044348 | other | upstream | 10274 | 32139843 ~ 32139958 (-) | True | XLOC_022484 |
| TCONS_00044359 | other | upstream | 196398 | 32325967 ~ 32334114 (-) | True | XLOC_022488 |
| TCONS_00044367 | other | upstream | 745977 | 32875546 ~ 32875660 (-) | True | XLOC_022497 |
| TCONS_00044368 | other | upstream | 1089436 | 33219005 ~ 33219128 (-) | True | XLOC_022498 |
| TCONS_00044369 | other | upstream | 1171735 | 33301304 ~ 33301419 (-) | True | XLOC_022500 |
