Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00047588 |
| length | 1557 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | XLOC_023967 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007136.7 |
| NCBI id | CM002909.2 |
| chromosome length | 37502051 |
| location | 14694876 ~ 14739282 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0072015 | glomerular visceral epithelial cell development | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-8903 | Predicted to enable hydrolase activity. Acts upstream of or within glomerular visceral epithelial cell development. Is expressed in several structures, including immature eye; nervous system; neural keel; neural plate; and neural tube. Orthologous to human MPPED2 (metallophosphoesterase domain containing 2). |
| ensembl_id | ENSDART00000188093 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00047584 | lncRNA | upstream | 261906 | 14431539 ~ 14433008 (+) | True | XLOC_023964 |
| TCONS_00047567 | lncRNA | upstream | 1069191 | 13619831 ~ 13625723 (+) | False | XLOC_023953 |
| TCONS_00049205 | lncRNA | upstream | 1069191 | 13620552 ~ 13625723 (+) | False | XLOC_023953 |
| TCONS_00049206 | lncRNA | upstream | 1069191 | 13621560 ~ 13625723 (+) | False | XLOC_023953 |
| TCONS_00049204 | lncRNA | upstream | 1132100 | 13558992 ~ 13562814 (+) | True | XLOC_023952 |
| TCONS_00049207 | lncRNA | downstream | 193557 | 14931982 ~ 14951172 (+) | False | XLOC_023969 |
| TCONS_00049030 | lncRNA | downstream | 195892 | 14934317 ~ 14934716 (+) | False | XLOC_023969 |
| TCONS_00049031 | lncRNA | downstream | 195892 | 14934317 ~ 14951262 (+) | False | XLOC_023969 |
| TCONS_00049208 | lncRNA | downstream | 195947 | 14934372 ~ 14951172 (+) | False | XLOC_023969 |
| TCONS_00049209 | lncRNA | downstream | 195947 | 14934372 ~ 15034584 (+) | False | XLOC_023969 |
| TCONS_00047585 | mRNA | upstream | 184432 | 14507567 ~ 14510482 (+) | True | XLOC_023965 |
| TCONS_00047582 | mRNA | upstream | 288183 | 14398650 ~ 14406731 (+) | False | XLOC_023963 |
| TCONS_00047583 | mRNA | upstream | 288426 | 14400704 ~ 14406488 (+) | True | XLOC_023963 |
| TCONS_00047581 | mRNA | upstream | 328837 | 14165447 ~ 14366077 (+) | True | XLOC_023962 |
| TCONS_00047579 | mRNA | upstream | 569416 | 14109626 ~ 14125498 (+) | True | XLOC_023959 |
| TCONS_00047590 | mRNA | downstream | 131618 | 14870043 ~ 14899109 (+) | False | XLOC_023968 |
| TCONS_00047591 | mRNA | downstream | 131652 | 14870077 ~ 14898414 (+) | True | XLOC_023968 |
| TCONS_00047596 | mRNA | downstream | 534945 | 15273370 ~ 15285590 (+) | True | XLOC_023974 |
| TCONS_00047597 | mRNA | downstream | 548611 | 15287036 ~ 15351444 (+) | True | XLOC_023975 |
| TCONS_00047598 | mRNA | downstream | 615670 | 15354095 ~ 15482419 (+) | True | XLOC_023976 |
| TCONS_00047586 | other | upstream | 10567 | 14684233 ~ 14684347 (+) | True | XLOC_023966 |
| TCONS_00047580 | other | upstream | 560210 | 14134590 ~ 14134704 (+) | True | XLOC_023961 |
| TCONS_00047574 | other | upstream | 895061 | 13799157 ~ 13799853 (+) | True | XLOC_023957 |
| TCONS_00047563 | other | upstream | 1413248 | 13281610 ~ 13281666 (+) | True | XLOC_023948 |
| TCONS_00047558 | other | upstream | 1498172 | 13196626 ~ 13196742 (+) | True | XLOC_023943 |
| TCONS_00047592 | other | downstream | 202363 | 14940788 ~ 14940902 (+) | True | XLOC_023969 |
| TCONS_00047593 | other | downstream | 381172 | 15119597 ~ 15119730 (+) | True | XLOC_023971 |
| TCONS_00047594 | other | downstream | 396177 | 15134602 ~ 15134718 (+) | True | XLOC_023972 |
| TCONS_00047595 | other | downstream | 479399 | 15217824 ~ 15218109 (+) | True | XLOC_023973 |
| TCONS_00047599 | other | downstream | 749069 | 15487494 ~ 15489644 (+) | True | XLOC_023978 |
