RNA id: TU2377224


Basic Information

Item Value
RNA id TU2377224
length 406
lncRNA type intronic
GC content 0.40
exon number 2
gene id G2079113
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37075054 ~ 37077168 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGGTATGCGTGGTCCTTTGACATTGGTATTCGTAGTCCTTTGATATTGGTATGTGTAGTCCTTTGACATTGGTATGTGTAGTCCTTTGACATTGGTATGCGTAGTCCTTTGACATTGGTATGTGTAGTCCTTTGACATTGGTATGTGTAGTCCTTTGACATTGGTATGCGTAGTCCTTTGACATTGGTATTCGTAGTCCTTTGACATTGGTATGTGTAGTCCTTTGACATTGGTATTCGTAGTCCTTTGACATTGGTATGCGTAGTCATTTGACATTGGTATGTGTAGTCCTTTGACATTGGTATGTGTAGTCCTTTGACATTAGTATGCGTAGTCCTTTGACATTGGTATGTGTAGTCCTTTGACATTGGTATGTGTAGTCCTTTGACATTGGTATTCGTAGTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2377211 lncRNA upstream 12074 37062698 ~ 37062980 (+) True G2079106
TU2377210 lncRNA upstream 12541 37062283 ~ 37062513 (+) True G2079105
TU2377207 lncRNA upstream 16691 37058082 ~ 37058363 (+) True G2079102
TU2377197 lncRNA upstream 41581 37033263 ~ 37033473 (+) True G2079093
TU2377194 lncRNA upstream 44584 37014509 ~ 37030470 (+) True G2079091
TU2377226 lncRNA downstream 4625 37081793 ~ 37082232 (+) True G2079114
TU2377231 lncRNA downstream 8106 37085274 ~ 37085574 (+) True G2079116
TU2377250 lncRNA downstream 44980 37122148 ~ 37122352 (+) True G2079130
TU2377254 lncRNA downstream 50043 37127211 ~ 37127440 (+) True G2079134
TU2377256 lncRNA downstream 51651 37128819 ~ 37129029 (+) True G2079136
XM_036965234.1 mRNA upstream 211087 36707926 ~ 36863967 (+) False LOC110507948
XM_036965235.1 mRNA upstream 211087 36707926 ~ 36863967 (+) False LOC110507948
XM_036965236.1 mRNA upstream 211087 36707926 ~ 36863967 (+) False LOC110507948
XM_036965238.1 mRNA upstream 211087 36736717 ~ 36863967 (+) True LOC110507948
XM_036965237.1 mRNA upstream 225036 36707926 ~ 36850018 (+) False LOC110507948
XM_036965198.1 mRNA downstream 241548 37318716 ~ 37357606 (+) True mre11a
trnat-agu-151 mRNA downstream 428393 37505561 ~ 37505634 (+) True trnat-agu-151
trnat-agu-152 mRNA downstream 428561 37505729 ~ 37505802 (+) True trnat-agu-152
XM_036965780.1 mRNA downstream 459361 37536529 ~ 37568873 (+) False LOC110508012
XM_036965781.1 mRNA downstream 475546 37552714 ~ 37568873 (+) True LOC110508012
TU2376553 other upstream 635700 36438375 ~ 36439354 (+) True LOC110508005
TU2376423 other upstream 773012 36300938 ~ 36302042 (+) False G2078493
TU2377138 other downstream 196318 37273486 ~ 37276857 (+) True LOC110536894
TU2377335 other downstream 201937 37279105 ~ 37280832 (+) True G2079197
TU2377712 other downstream 289571 37366739 ~ 37368136 (+) True G2079468
TU2377942 other downstream 738710 37815878 ~ 37819286 (+) False G2079657
TU2377944 other downstream 738710 37815878 ~ 37819286 (+) True G2079657

Expression Profile