RNA id: TCONS_00066073


Basic Information

Item Value
RNA id TCONS_00066073
length 912
RNA type mRNA
GC content 0.52
exon number 8
gene id XLOC_033773
representative False

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 28901786 ~ 28999142 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGCCTCCAACTTCAATGACATTGTCAAGCAGGGCTATGTCCGCATGCGGAGCAGGAAACTGGGGatctATCGACGCTGCTGGCTGGTGTTTAAGAAGTCATCCAGTAAAGGACCTCGCAGACTGGAAAAATACCCTGATGAGAAGTCAGCCTACATCAGAGCCTGTCCTAAGGTGACAGAGATTAGTAATGTGAAGAACGTCACAAGATTGCCTCGTGACACGAAGCGACAGGCCGTGGCCATCGTTTTTACAGACGACACCTCTCGAACCTTCACCTGCGAATCAGAGCTGGAGGCTGAGGAGTGGTTTAAGACCTTGTCTATCGAGTGCCTGGGGACGCGTCTGAATGACATTAGTCTTGGAGAGCCAGACCTCCTGGCCGCTGgagttcagtgtgaacacacagAGCGTTTTAATGTGTTCCTGTTGCCCTGCCCAAATCTGGACATCTACGGTGAGTGTATGATGCagatcacacatgaaaacatctACCTGTGGGACATTCACAACCCTCGCACCAAGCTGGTAACCTGGCCGCTTTGTTCGCTACGCCGATACGGACGAGACGCTACACGCTTCACCTTCGAGGCTGGCAgGATGTGTGACAGTGGGGAGGGCCTGTACACTTTCCAGACACGGGAAGGAGAGCAGATCTACCAAAGGGTCCATTCTTCCACGCTGGCTATAGCTGAGCAGCATAAGAGAGTCCTCATGGAAATGGAGAAAAACAGCAAGCTTTTATCCAAGGGTCCAGAGGGGACGTCCTACCCTTGCACCCCAACAGCAATCTTACCACGAAGTGCTTTCTGGCACCACATCACCGGATCACAGGCTGGAGTGGACTCTGCTAATGGAGGCTGTCAATGCATAGCAGAAACACAGCTGCTGCAACAACTGTtgtcaaaataa

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-041008-91 Orthologous to human DOK4 (docking protein 4).

Ensembl:

ensembl_id ENSDART00000182903

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00066064 lncRNA upstream 770837 28058202 ~ 28189681 (+) True XLOC_033767
TCONS_00068575 lncRNA upstream 871501 28058202 ~ 28089017 (+) False XLOC_033767
TCONS_00068859 lncRNA upstream 1128195 27823531 ~ 27832323 (+) False XLOC_033764
TCONS_00068576 lncRNA downstream 72316 29062175 ~ 29064397 (+) True XLOC_033780
TCONS_00066088 lncRNA downstream 95703 29085562 ~ 29090937 (+) True XLOC_033782
TCONS_00066099 lncRNA downstream 192217 29182076 ~ 29182727 (+) True XLOC_033789
TCONS_00068862 lncRNA downstream 288708 29278567 ~ 29280954 (+) True XLOC_033790
TCONS_00068577 lncRNA downstream 471506 29461365 ~ 29462263 (+) True XLOC_033793
TCONS_00066071 mRNA upstream 123200 28724919 ~ 28837318 (+) True XLOC_033772
TCONS_00066068 mRNA upstream 337226 28612671 ~ 28623292 (+) False XLOC_033771
TCONS_00066069 mRNA upstream 337247 28615033 ~ 28623271 (+) True XLOC_033771
TCONS_00066062 mRNA upstream 913298 27977065 ~ 28047220 (+) False XLOC_033767
TCONS_00066076 mRNA downstream 15763 29005622 ~ 29006398 (+) True XLOC_033774
TCONS_00066077 mRNA downstream 19302 29009161 ~ 29010135 (+) True XLOC_033775
TCONS_00066078 mRNA downstream 22174 29012033 ~ 29013884 (+) False XLOC_033776
TCONS_00066079 mRNA downstream 22185 29012044 ~ 29017892 (+) False XLOC_033776
TCONS_00066081 mRNA downstream 34423 29024282 ~ 29040707 (+) True XLOC_033777
TCONS_00066070 other upstream 226998 28724910 ~ 28733520 (+) False XLOC_033772
TCONS_00066067 other upstream 498940 28461463 ~ 28461578 (+) True XLOC_033770
TCONS_00066066 other upstream 701892 28255096 ~ 28258626 (+) True XLOC_033769
TCONS_00066065 other upstream 705341 28253644 ~ 28255177 (+) False XLOC_033769
TCONS_00066060 other upstream 1047463 27912938 ~ 27913055 (+) True XLOC_033768
TCONS_00066080 other downstream 24280 29014139 ~ 29015168 (+) True XLOC_033776
TCONS_00066092 other downstream 143545 29133404 ~ 29140443 (+) True XLOC_033785
TCONS_00066097 other downstream 187065 29176924 ~ 29182744 (+) False XLOC_033789
TCONS_00066103 other downstream 513015 29502874 ~ 29506131 (+) False XLOC_033795
TCONS_00066104 other downstream 513372 29503231 ~ 29505187 (+) False XLOC_033795

Expression Profile

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