RNA id: TCONS_00069280


Basic Information

Item Value
RNA id TCONS_00069280
length 338
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id XLOC_035005
representative False

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 43131218 ~ 43423919 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TACACAGTGACCTGAAGCAAACTCCAACACAGAGTAATACCTGATGCCAGAAATTAAACTAACACTGAGGATAACCCATACATACAGAAGCAAAGACAAACAGCCGGGACCCAGAATTGTCCGTTTTGTGGAGAATGCCCAGCTCTTGGTCTCTGAAAACCTTCAAGTGCTTCCAAATCATCTTTCAAAATTCAGCTGGACCTGTCTTCCACCTGAGCTGTGCTCTACATGACCTCGTCTATCCTCTCTGCACTGGACATCACAGACACTGCACTTGCTGGATTGTTTTGAATGGTGAGCCCAATGGTGATGCTCATTCACCCTGAGACCGGATTCCC

Function

GO:

id name namespace
GO:0009259 ribonucleotide metabolic process biological_process
GO:0048468 cell development biological_process
GO:0009260 ribonucleotide biosynthetic process biological_process
GO:0046031 ADP metabolic process biological_process
GO:0030154 cell differentiation biological_process
GO:0000902 cell morphogenesis biological_process
GO:0000904 cell morphogenesis involved in differentiation biological_process
GO:0006096 glycolytic process biological_process
GO:1901293 nucleoside phosphate biosynthetic process biological_process
GO:0030182 neuron differentiation biological_process
GO:0048812 neuron projection morphogenesis biological_process
GO:0120036 plasma membrane bounded cell projection organization biological_process
GO:0120039 plasma membrane bounded cell projection morphogenesis biological_process
GO:0006163 purine nucleotide metabolic process biological_process
GO:0006164 purine nucleotide biosynthetic process biological_process
GO:0048858 cell projection morphogenesis biological_process
GO:0048869 cellular developmental process biological_process
GO:0032990 cell part morphogenesis biological_process
GO:0046390 ribose phosphate biosynthetic process biological_process
GO:0009135 purine nucleoside diphosphate metabolic process biological_process
GO:0006757 ATP generation from ADP biological_process
GO:0009150 purine ribonucleotide metabolic process biological_process
GO:0009152 purine ribonucleotide biosynthetic process biological_process
GO:0042866 pyruvate biosynthetic process biological_process
GO:0072521 purine-containing compound metabolic process biological_process
GO:0072522 purine-containing compound biosynthetic process biological_process
GO:0009165 nucleotide biosynthetic process biological_process
GO:0061564 axon development biological_process
GO:0009179 purine ribonucleoside diphosphate metabolic process biological_process
GO:0030030 cell projection organization biological_process
GO:0048666 neuron development biological_process
GO:0048667 cell morphogenesis involved in neuron differentiation biological_process
GO:0009185 ribonucleoside diphosphate metabolic process biological_process
GO:0007399 nervous system development biological_process
GO:0019693 ribose phosphate metabolic process biological_process
GO:0007409 axonogenesis biological_process
GO:0022008 neurogenesis biological_process
GO:0048699 generation of neurons biological_process
GO:0031175 neuron projection development biological_process
GO:0004619 phosphoglycerate mutase activity molecular_function
GO:0016868 intramolecular transferase activity, phosphotransferases molecular_function
GO:0004082 bisphosphoglycerate mutase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00068695 lncRNA downstream 61506 43254190 ~ 43256072 (-) False XLOC_035006
TCONS_00068694 lncRNA downstream 61565 43254190 ~ 43256013 (-) False XLOC_035006
TCONS_00068696 lncRNA downstream 61589 43254671 ~ 43255989 (-) True XLOC_035006
TCONS_00069279 lncRNA downstream 397554 42911710 ~ 42920024 (-) True XLOC_035004
TCONS_00069278 lncRNA downstream 410380 42904367 ~ 42907198 (-) True XLOC_035003
TCONS_00068077 lncRNA upstream 46110 43468336 ~ 43475531 (-) True XLOC_035007
TCONS_00068079 lncRNA upstream 181731 43603957 ~ 43715419 (-) False XLOC_035009
TCONS_00068080 lncRNA upstream 181736 43603962 ~ 43715439 (-) False XLOC_035009
TCONS_00068081 lncRNA upstream 216537 43638763 ~ 43715420 (-) False XLOC_035009
TCONS_00069283 lncRNA upstream 216539 43638765 ~ 43642242 (-) True XLOC_035009
TCONS_00068068 mRNA downstream 1110858 41981366 ~ 42206720 (-) True XLOC_034996
TCONS_00068067 mRNA downstream 1349407 41951967 ~ 41968171 (-) True XLOC_034994
TCONS_00068065 mRNA downstream 1352683 41951786 ~ 41964895 (-) False XLOC_034994
TCONS_00068066 mRNA downstream 1352683 41951967 ~ 41964895 (-) False XLOC_034994
TCONS_00068064 mRNA downstream 1352701 41947739 ~ 41964877 (-) False XLOC_034994
TCONS_00068082 mRNA upstream 337923 43760149 ~ 43840680 (-) False XLOC_035010
TCONS_00068083 mRNA upstream 338627 43760853 ~ 43787616 (-) False XLOC_035010
TCONS_00068084 mRNA upstream 339245 43761471 ~ 43840418 (-) False XLOC_035010
TCONS_00068085 mRNA upstream 339245 43761471 ~ 43857938 (-) False XLOC_035010
TCONS_00068087 mRNA upstream 1177087 44599313 ~ 44604540 (-) False XLOC_035012
TCONS_00068072 other downstream 505409 42812055 ~ 42812169 (-) True XLOC_035002
TCONS_00068070 other downstream 1026484 42290978 ~ 42291094 (-) True XLOC_034998
TCONS_00068069 other downstream 1164054 42153410 ~ 42153524 (-) True XLOC_034997
TCONS_00068043 other downstream 1824447 41493017 ~ 41493131 (-) True XLOC_034985
TCONS_00068036 other downstream 1901271 41414590 ~ 41416307 (-) True XLOC_034982
TCONS_00068078 other upstream 140898 43563124 ~ 43563240 (-) True XLOC_035008
TCONS_00068096 other upstream 1245777 44668003 ~ 44668117 (-) True XLOC_035015
TCONS_00068102 other upstream 1484073 44906299 ~ 44906413 (-) True XLOC_035020
TCONS_00068110 other upstream 2318266 45740492 ~ 45740608 (-) True XLOC_035026
TCONS_00068120 other upstream 2804018 46226244 ~ 46226360 (-) True XLOC_035035

Expression Profile

//