RNA id: TU198516


Basic Information

Item Value
RNA id TU198516
length 214
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G146986
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 28724210 ~ 28778995 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cagagacacacacacacagacagagagacacacacacagagacacacacacagagacacacacacacagagacacacacacacagacagagacacacacagacagacacacagacagacacacagacagacacacagacagacacacagacagagacacacacagagacacacacagagacacacacagagacacacacagacagagagacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU198519 lncRNA upstream 15513 28759641 ~ 28763053 (+) True G146989
TU198158 lncRNA upstream 204123 28551799 ~ 28574443 (+) True G146755
TU198201 lncRNA upstream 229872 28539345 ~ 28548694 (+) True LOC120572290
TU198527 lncRNA downstream 70426 28849421 ~ 28854853 (+) True G146996
TU198539 lncRNA downstream 112340 28891335 ~ 28903339 (+) True G147007
TU198549 lncRNA downstream 158071 28937066 ~ 28941715 (+) True G147017
TU198569 lncRNA downstream 268900 29047895 ~ 29065509 (+) True G147035
TU198581 lncRNA downstream 317275 29096270 ~ 29096600 (+) True G147042
XM_039823236.1 mRNA upstream 21881 28741993 ~ 28756685 (+) True LOC120573484
XM_039821907.1 mRNA upstream 67506 28706623 ~ 28711060 (+) True LOC120572585
XM_039821906.1 mRNA upstream 74419 28683021 ~ 28704147 (+) True LOC120572584
XM_039821412.1 mRNA upstream 107745 28662620 ~ 28670821 (+) True LOC120572212
XM_039821904.1 mRNA upstream 127020 28617865 ~ 28651546 (+) True tec
XM_039823295.1 mRNA downstream 148347 28927342 ~ 28930638 (+) True LOC120573516
XM_039821457.1 mRNA downstream 293815 29072810 ~ 29077484 (+) True LOC120572238
XM_039821455.1 mRNA downstream 301218 29080213 ~ 29090950 (+) True LOC120572237
XM_039821456.1 mRNA downstream 301218 29080213 ~ 29090950 (+) False LOC120572237
XM_039822396.1 mRNA downstream 395348 29174343 ~ 29236780 (+) False LOC120572882
TU198224 other upstream 127053 28638750 ~ 28651513 (+) False tec
TU198223 other upstream 127053 28639080 ~ 28651513 (+) False tec
TU198209 other upstream 147458 28617924 ~ 28631108 (+) False tec
TU198152 other upstream 193499 28555552 ~ 28585067 (+) True G146753
TU198568 other downstream 250487 29029482 ~ 29065509 (+) False G147035
TU198572 other downstream 250487 29029482 ~ 29065509 (+) False G147035
TU198574 other downstream 250487 29029482 ~ 29065509 (+) False G147035
TU198769 other downstream 490419 29269414 ~ 29480487 (+) True G147192
TU198771 other downstream 635317 29414312 ~ 29421799 (+) True LOC120572956

Expression Profile