RNA id: XM_039826323.1


Basic Information

Item Value
RNA id XM_039826323.1
length 1717
RNA type mRNA
GC content 0.56
exon number 12
gene id adsl
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6082777 ~ 6093726 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aaaaaaaagaaaaagaggaagaaagaagaatCTTCCCTGGATCCCATGCGTGATGCTACAAGCCGAAGACGGCGCCGTTACTTGGAAAGCTAGTGTGTGTTGGTGAAGGTGCAGGGCagacttttttgtgtgtttcagcGGACACCACTTCGTCTTTACAAACATGGAGGGAGCCGACGAGTTCATGAAGTACCGTTCCCCGCTGGTGTCGAGGTATGCCAGCAAGGAAATGGCGTACAACTTCAGTGACAGGAAGAAATTCACCACCTGGAGAAAGCTGTGGATCTACCTGGCTAAGGCTGAGAAGGCTTTGGGTCTGCCCATCACCGACGCCCAGATTCTGGAGATGGAGAGCCATGAGGTGGACATTGACTTCGCCATGGCGGCCGAGGAGGAGCGGAAGCTCAGGCACGACGTCATGGCCCACGTCCACACCTTCGCACACTGCTGCCCCACTGCTGCTCCCATCATCCACCTCGGTGCCACCTCCTGCTACGTGGGAGACAATACTgATCTCATTATGCTGCGTGACGGATTCGACCTTCTCTTGCCTAAGCTGGCCAGAGTCATTGACAGGCTGGCAAACTTTGCAGAGAAATACGCCGACCTTCCCACGCTCGGCTTCACACACTACCAGCCTGCCCAGTTGACCACGGTAGGAAAGCGAGCGTGTCTGTGGTTGCAGGACTTGGCCATGGACATGCGGAACCTGCAGCGAGCCCGCGATGATCTGCGTTTCCGGGGGGTTAAGGGCACCACAGGCACCCAGGCCAGCTTCCTGCAGCTCTTTCAGGGGGACCATGATAAGGTAGAAGAGCTTGACAGAATGGTGACAAAGATGGCTGGCTTCGAAAAAGCCTACCTGGTAACTGGACAGACATACAGCCGTAAGGTGGACGTAGACTGTGTGGCCAGCCTGGCCAGTTTGGGAGCCACTGTCCACAAGCTCTGTACAGACATCCGCCTGCTCGCCAACCTGAAGGAGATTGAGGAGCCTTTTGAGAAAGAACAGATTGGTTCCAGTGCCATGCCCTACAAGAGGAACCCGATGCGCGCAGAGCGTTGCTGCAGCTTGGCCCGACATCTGGTGGCGCTGATGGCCGACCCGCTGCAGACGGCGTCCGTCCAGTGGCTGGAGAGGACGCTGGACGACAGCGCCAACAGGAGGATCTCCCTGCCTGAGTCCTTCCTGACAGCTGACATCATCCTCAGCACTCTGCAGAACATCACCGAGGGACTGGTGGTCTACCCTAAAGTCATCGAGAGACACATCCGCCATGAGCTGCCCTTCATGGCCACAGAGAACATCATTATGGCCATGGTGAAGGCCGGAGGAAACAGACAGGACTGCCACGAGAAGATCCGTGTTCTTTCCCAGGAGGCAGCCGCTGTGGTCAAACAGGAGGGTGGGGATAACGACCTGCTGGCCAGAGTCCAGCGAGACCCCTACTTCGCCCCCATCCTGGGGCAGCTGGACGCCGTACTGGACCCTAAGACCTTTATCGGCCGCGCTCCCCAGCAGGTGGCCAGGTTCCTGTCTGAGGAGGTCCGCCCCCTGCTGGAGCCTTACAAGGCTAAGATGGATGTCAAGATCGAGCTTGAGCTCTGACGCGCGCACACGGAGACAATGAGTCGCACACAAATCAAAAGGAGACTTCATCGTGGTGCGTGGCCATGCTGAACTCTGCACCTCAATAAAGAACAGTTGTTGAATGAA

Function

GO:

id name namespace
GO:0009152 purine ribonucleotide biosynthetic process biological_process
GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity molecular_function

KEGG:

id description
K01756 purB, ADSL; adenylosuccinate lyase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206405 lncRNA upstream 65306 6017217 ~ 6017471 (+) True G152350
TU206387 lncRNA upstream 80135 6000129 ~ 6002642 (+) True G152336
TU206238 lncRNA upstream 125460 5953428 ~ 5957317 (+) True chst12a
TU206220 lncRNA upstream 208474 5873764 ~ 5874303 (+) True G152201
TU206194 lncRNA upstream 252114 5794124 ~ 5830663 (+) True G152179
TU206451 lncRNA downstream 193 6093919 ~ 6094215 (+) True G152387
TU206483 lncRNA downstream 55539 6149265 ~ 6149583 (+) True G152415
TU206592 lncRNA downstream 265343 6359069 ~ 6359290 (+) True G152483
TU206594 lncRNA downstream 278509 6372235 ~ 6372529 (+) True G152485
TU206595 lncRNA downstream 279603 6373329 ~ 6373554 (+) True G152486
XM_039826319.1 mRNA upstream 10845 6068936 ~ 6071932 (+) True atf4b
XM_039826318.1 mRNA upstream 14031 6055758 ~ 6068746 (+) True LOC120575492
XM_039824609.1 mRNA upstream 41126 6037258 ~ 6041651 (+) True mief1
XM_039826251.1 mRNA upstream 48697 6023234 ~ 6034080 (+) True LOC120575455
XM_039825195.1 mRNA upstream 128267 5950426 ~ 5954510 (+) False chst12a
XM_039825328.1 mRNA downstream 1413 6095139 ~ 6100227 (+) True tmem150b
XM_039825742.1 mRNA downstream 40934 6134660 ~ 6148129 (+) True pdgfbb
XM_039825743.1 mRNA downstream 47552 6141278 ~ 6148129 (+) False pdgfbb
XM_039826151.1 mRNA downstream 88666 6182392 ~ 6228086 (+) True pvalb6
XM_039826153.1 mRNA downstream 121224 6214950 ~ 6228086 (+) False pvalb6
TU206243 other upstream 129412 5950424 ~ 5953365 (+) False chst12a
TU206154 other upstream 352508 5725886 ~ 5730269 (+) False G152149
TU206143 other upstream 453505 5626227 ~ 5629272 (+) False slc29a4
TU206111 other upstream 532231 5549291 ~ 5550546 (+) False G152125
TU206083 other upstream 618474 5461965 ~ 5464303 (+) False rbx1
TU206798 other downstream 1177267 7270993 ~ 7273343 (+) False dexi
TU206790 other downstream 1246267 7339993 ~ 7356838 (+) True emp2
XR_005641999.1 other downstream 1979282 8073008 ~ 8073081 (+) True LOC120575508
XR_005642011.1 other downstream 1979510 8073236 ~ 8073305 (+) True LOC120575520
TU207102 other downstream 2033539 8127265 ~ 8127981 (+) True G152892

Expression Profile