RNA id: TCONS_00007042


Basic Information

Item Value
RNA id TCONS_00007042
length 1632
RNA type mRNA
GC content 0.40
exon number 12
gene id XLOC_003615
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 36665359 ~ 36674376 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTAGTCTGTGTTACTTCCTAATTTACCCATTGTGTAAGTTTCATTGTTTTACACTCACTGTGATGGAGTTGTTCGTCTTCATTGTTTTTCAGCTCCTTATTGAGGTTCAGTCTAACAATGCTCCTACTGTACATGTATCTCCAGCTGTCTTTAGTGAATCCAGATCAGTGCAGATCAGCTGTGAGACGCCAGCAGATATTACAGTGAAGCATTGTGATTTCACAATAAACAGAAAACAGCTAGAAATAAAAGTCAGTCCTCTATGTGAGCTCAACCTCACTGGTGCTGAAGTGCTCAGACAGGCAGGTGGAAAATCTCCTCAATCAGTCAATATTACTTGCTGCTACACAATAAAAGGGAGACGCAAGAAAAAATCTTCTGATTCAGTTCCTGCCACAGTCACAGTTCTAGACCAACTTCAGAAACCCGTCATCAGTGTTACTGAATACGAGAATCACCTCGGCATAACCTGTAAAATACCACTTTCAGTCAGAGCTGACTTCACCTGTAGTTTTTACTATGAAGATGATGCTATTCTGGTCAACCGTGACTCTCAGTGGAGATCATCTGTAGAGAAACATATTTGTGTGTTTAATCCAACTCTTAGTGATCTCTTGAGAAGATCAGTGAAGAGCAGAAAGTTAAGCTGTGATTATTCACTGAAGACTGAACCTGACATCAGATCTCCACACAGTGACACACACATCATTGAAGCTCTTCCTCAGGCCAGACTGTCAGCATCTGCTTCAGTTCTTCGGGAATCAGACACAGTTGAGCTGAGCTGTGGGAATACTGAAGAGCTGAAGATGGAGATGTGTGTCTTCAACATTAATGGAAGAGAAACCTACTCAAATCCAAGCTTCTCATGTCAGCTCTCTCTCAATGCATCTCAGATCAGTGTTTGGTCAGAAGATCAGAGGTCATCAGTGAGAATAACCTGCTTCTACGTCGTGAAGAAGGGACAATTTAATGTACTATCTCCTCCCTCTGATCCAGTGACAGTCACAGTCCAGAtttcatCATCTACTACTGCACTCGTTACAATGACCATGACCATGGAAAGTACAGCATCAACTTCAACGTCAACTTCTGAAAGCACACAGATATACAGTACAGCAGCAGACCTCAATTCAAAGACAAATCTGTCAACCAGCAGAACCATCCAAACAACGTCTGATTCAACAGTTCACACTTCAACAGATCAACCAACCACAACAAAACACACagCAGCATCGACTCCTGAATCCACCACAAAGACAGAAACATCTGTTCCTTATGTTACTCACACTGAAGGCCAATTGCTTCATTTCTGTCTGGGCTCATCGGACTGATGCATCTTTGCTGTTTTATTAGTTCTGTTGATGACGTGAACTACACCTTGTGGAGAAAACATCTCTTTTTACTTCTATGTTCCTCAAAACATGTCACCTGCTTCATTACACTTAAGGCACCATTATAGCTATGTGTAccactttattttgtatatatctctgcaaatatttacatttttaaatgattacttttcTATTAGATGAAGcagtcaaaattaaacaaatgaaaaatgcatCTTAAACTTTCATTTTCCATTTTTTCTGAGTACTTCAACAACGGATAATTGACACTCGCTTTAAT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141216-426 No description available

Ensembl:

ensembl_id ENSDART00000166144

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007041 lncRNA upstream 6720 36657025 ~ 36658639 (+) True XLOC_003614
TCONS_00007040 lncRNA upstream 8594 36653213 ~ 36656765 (+) True XLOC_003613
TCONS_00007038 lncRNA upstream 24504 36600242 ~ 36640855 (+) True XLOC_003611
TCONS_00007039 lncRNA upstream 52195 36612354 ~ 36613164 (+) True XLOC_003612
TCONS_00007037 lncRNA upstream 74871 36587329 ~ 36590488 (+) True XLOC_003610
TCONS_00007052 lncRNA downstream 422143 37096519 ~ 37100149 (+) False XLOC_003622
TCONS_00008651 lncRNA downstream 462424 37136800 ~ 37137842 (+) False XLOC_003623
TCONS_00008652 lncRNA downstream 462700 37137076 ~ 37137842 (+) False XLOC_003623
TCONS_00007056 lncRNA downstream 495437 37169813 ~ 37170438 (+) True XLOC_003623
TCONS_00007065 lncRNA downstream 581927 37256303 ~ 37259663 (+) False XLOC_003627
TCONS_00007025 mRNA upstream 175543 36477481 ~ 36489816 (+) True XLOC_003601
TCONS_00007024 mRNA upstream 249659 36409457 ~ 36415700 (+) True XLOC_003600
TCONS_00007023 mRNA upstream 250095 36408636 ~ 36415264 (+) False XLOC_003600
TCONS_00007021 mRNA upstream 257493 36379293 ~ 36407866 (+) False XLOC_003599
TCONS_00007019 mRNA upstream 289286 36355348 ~ 36376073 (+) False XLOC_003598
TCONS_00007043 mRNA downstream 1223 36675599 ~ 36683726 (+) True XLOC_003616
TCONS_00007044 mRNA downstream 9483 36683859 ~ 36687267 (+) True XLOC_003617
TCONS_00007045 mRNA downstream 103237 36777613 ~ 36785073 (+) False XLOC_003618
TCONS_00007046 mRNA downstream 103238 36777614 ~ 36788797 (+) True XLOC_003618
TCONS_00007047 mRNA downstream 315320 36989696 ~ 37035835 (+) True XLOC_003619
TCONS_00007036 other upstream 82987 36582258 ~ 36582372 (+) True XLOC_003609
TCONS_00007022 other upstream 279535 36379348 ~ 36385824 (+) True XLOC_003599
TCONS_00007020 other upstream 296167 36355363 ~ 36369192 (+) True XLOC_003598
TCONS_00007007 other upstream 1571637 35093605 ~ 35093722 (+) True XLOC_003588
TCONS_00007005 other upstream 1609827 35048642 ~ 35055532 (+) False XLOC_003587
TCONS_00007048 other downstream 320318 36994694 ~ 36994808 (+) True XLOC_003620
TCONS_00007061 other downstream 539732 37214108 ~ 37214223 (+) True XLOC_003626
TCONS_00007069 other downstream 690070 37364446 ~ 37364560 (+) True XLOC_003628
TCONS_00007077 other downstream 964604 37638980 ~ 37649103 (+) False XLOC_003630
TCONS_00007079 other downstream 964606 37638982 ~ 37650964 (+) False XLOC_003630

Expression Profile

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