Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073202 |
| length | 1440 |
| lncRNA type | antisense |
| GC content | 0.39 |
| exon number | 3 |
| gene id | XLOC_037190 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 28243624 ~ 28248981 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0002065 | columnar/cuboidal epithelial cell differentiation | biological_process |
| GO:0048869 | cellular developmental process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0060290 | transdifferentiation | biological_process |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0004679 | AMP-activated protein kinase activity | molecular_function |
| ensembl_id | ENSDART00000167161 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00074908 | lncRNA | upstream | 112889 | 28128698 ~ 28130735 (+) | False | XLOC_037187 |
| TCONS_00074909 | lncRNA | upstream | 112889 | 28129107 ~ 28130735 (+) | True | XLOC_037187 |
| TCONS_00075130 | lncRNA | upstream | 432483 | 27807527 ~ 27811141 (+) | True | XLOC_037181 |
| TCONS_00075128 | lncRNA | upstream | 827401 | 27411331 ~ 27416223 (+) | False | XLOC_037177 |
| TCONS_00075129 | lncRNA | upstream | 827401 | 27411615 ~ 27416223 (+) | True | XLOC_037177 |
| TCONS_00075131 | lncRNA | downstream | 92130 | 28341111 ~ 28344611 (+) | True | XLOC_037191 |
| TCONS_00073203 | lncRNA | downstream | 150343 | 28399324 ~ 28403146 (+) | True | XLOC_037192 |
| TCONS_00075132 | lncRNA | downstream | 339876 | 28588857 ~ 28590308 (+) | False | XLOC_037193 |
| TCONS_00075133 | lncRNA | downstream | 339909 | 28588890 ~ 28590308 (+) | True | XLOC_037193 |
| TCONS_00075134 | lncRNA | downstream | 353158 | 28602139 ~ 28606711 (+) | True | XLOC_037194 |
| TCONS_00073201 | mRNA | upstream | 9180 | 28232522 ~ 28234444 (+) | True | XLOC_037189 |
| TCONS_00073199 | mRNA | upstream | 35075 | 28140089 ~ 28208549 (+) | False | XLOC_037188 |
| TCONS_00073200 | mRNA | upstream | 35075 | 28150275 ~ 28208549 (+) | True | XLOC_037188 |
| TCONS_00073197 | mRNA | upstream | 114148 | 28103735 ~ 28129476 (+) | False | XLOC_037187 |
| TCONS_00073198 | mRNA | upstream | 115600 | 28116079 ~ 28128024 (+) | False | XLOC_037187 |
| TCONS_00073204 | mRNA | downstream | 349596 | 28598577 ~ 28604451 (+) | False | XLOC_037194 |
| TCONS_00073205 | mRNA | downstream | 349626 | 28598607 ~ 28606714 (+) | False | XLOC_037194 |
| TCONS_00073207 | mRNA | downstream | 439593 | 28688574 ~ 28691972 (+) | False | XLOC_037196 |
| TCONS_00073208 | mRNA | downstream | 440773 | 28689754 ~ 28691970 (+) | True | XLOC_037196 |
| TCONS_00073210 | mRNA | downstream | 444611 | 28693592 ~ 28696999 (+) | False | XLOC_037197 |
| TCONS_00073196 | other | upstream | 305206 | 27938302 ~ 27938418 (+) | True | XLOC_037186 |
| TCONS_00073191 | other | upstream | 398996 | 27834445 ~ 27844628 (+) | True | XLOC_037183 |
| TCONS_00073206 | other | downstream | 383404 | 28632385 ~ 28632500 (+) | True | XLOC_037195 |
| TCONS_00073213 | other | downstream | 473095 | 28722076 ~ 28740924 (+) | True | XLOC_037198 |
| TCONS_00073221 | other | downstream | 1193512 | 29442493 ~ 29442609 (+) | True | XLOC_037204 |
| TCONS_00073223 | other | downstream | 1269258 | 29518239 ~ 29518355 (+) | True | XLOC_037206 |
| TCONS_00073225 | other | downstream | 1271761 | 29520742 ~ 29527021 (+) | False | XLOC_037207 |
