Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU350277 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G295753 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 14518274 ~ 14518492 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU350223 | lncRNA | downstream | 120889 | 14397147 ~ 14397385 (-) | True | G295708 |
| XR_003403334.2 | lncRNA | downstream | 123510 | 14391963 ~ 14394764 (-) | True | LOC113532335 |
| TU350218 | lncRNA | downstream | 123515 | 14391568 ~ 14394759 (-) | False | LOC113532335 |
| TU350209 | lncRNA | downstream | 134467 | 14383581 ~ 14383807 (-) | True | trnas-gcu_12 |
| TU350206 | lncRNA | downstream | 135934 | 14382087 ~ 14382340 (-) | True | trnas-gcu_10 |
| TU350305 | lncRNA | upstream | 73643 | 14592135 ~ 14592466 (-) | True | trnal-cag_12 |
| TU350309 | lncRNA | upstream | 75924 | 14594416 ~ 14596412 (-) | True | G295783 |
| TU350364 | lncRNA | upstream | 151016 | 14669508 ~ 14669725 (-) | True | G295827 |
| TU350365 | lncRNA | upstream | 151609 | 14670101 ~ 14670310 (-) | True | G295828 |
| TU350374 | lncRNA | upstream | 169866 | 14688358 ~ 14688636 (-) | True | G295836 |
| XM_026923543.2 | mRNA | downstream | 162722 | 14345091 ~ 14355552 (-) | True | lgals8a |
| XM_026923485.2 | mRNA | downstream | 208009 | 14305201 ~ 14310265 (-) | True | tmem242 |
| XM_034313911.1 | mRNA | downstream | 413629 | 14047198 ~ 14104645 (-) | True | LOC113531878 |
| XM_026923306.2 | mRNA | downstream | 486168 | 14020127 ~ 14032106 (-) | True | cebpz |
| XM_026923400.2 | mRNA | downstream | 511396 | 14004144 ~ 14006878 (-) | False | LOC113532178 |
| XM_026923292.2 | mRNA | upstream | 38612 | 14557104 ~ 14588256 (-) | True | bcl11bb |
| XM_026923497.2 | mRNA | upstream | 103365 | 14621857 ~ 14632266 (-) | False | clu |
| XM_026923495.2 | mRNA | upstream | 103365 | 14621857 ~ 14632266 (-) | True | clu |
| XM_026923496.2 | mRNA | upstream | 103365 | 14621857 ~ 14632234 (-) | False | clu |
| XM_026923320.2 | mRNA | upstream | 163690 | 14682182 ~ 14686085 (-) | True | LOC113532135 |
| trnas-gcu_18 | other | downstream | 121273 | 14396920 ~ 14397001 (-) | True | trnas-gcu_18 |
| trnas-gcu_17 | other | downstream | 122086 | 14396107 ~ 14396188 (-) | True | trnas-gcu_17 |
| trnas-gcu_15 | other | downstream | 131578 | 14386615 ~ 14386696 (-) | True | trnas-gcu_15 |
| trnas-gcu_12 | other | downstream | 134459 | 14383734 ~ 14383815 (-) | False | trnas-gcu_12 |
| trnas-gcu_10 | other | downstream | 135926 | 14382267 ~ 14382348 (-) | False | trnas-gcu_10 |
| trnal-cag_12 | other | upstream | 73901 | 14592393 ~ 14592475 (-) | False | trnal-cag_12 |
| trnal-cag_13 | other | upstream | 75419 | 14593911 ~ 14593993 (-) | True | trnal-cag_13 |
| trnal-cag_14 | other | upstream | 76057 | 14594549 ~ 14594631 (-) | True | trnal-cag_14 |
| trnal-cag_15 | other | upstream | 77821 | 14596313 ~ 14596395 (-) | True | trnal-cag_15 |
| TU350820 | other | upstream | 755939 | 15274431 ~ 15304114 (-) | False | pkib |
