Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU353231 |
| length | 555 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G298309 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 19088101 ~ 19088655 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU353202 | lncRNA | downstream | 21169 | 19002340 ~ 19066932 (-) | False | G298286 |
| TU353203 | lncRNA | downstream | 21169 | 19002340 ~ 19066932 (-) | True | G298286 |
| TU353141 | lncRNA | downstream | 257810 | 18829534 ~ 18830291 (-) | True | G298243 |
| TU352819 | lncRNA | downstream | 526267 | 18561597 ~ 18561834 (-) | True | G297969 |
| TU352816 | lncRNA | downstream | 538488 | 18549260 ~ 18549613 (-) | True | G297966 |
| TU353274 | lncRNA | upstream | 127983 | 19216638 ~ 19217239 (-) | True | G298349 |
| TU353275 | lncRNA | upstream | 130462 | 19219117 ~ 19219681 (-) | True | G298350 |
| TU353288 | lncRNA | upstream | 137744 | 19226399 ~ 19226685 (-) | True | G298358 |
| TU353336 | lncRNA | upstream | 236842 | 19325497 ~ 19325707 (-) | True | G298400 |
| TU353390 | lncRNA | upstream | 269415 | 19358070 ~ 19567558 (-) | True | G298436 |
| XM_034313411.1 | mRNA | downstream | 4590 | 19070460 ~ 19083511 (-) | True | ubr7 |
| XM_026948159.2 | mRNA | downstream | 74005 | 19010684 ~ 19014096 (-) | True | si:dkey-85n7.8 |
| XM_034313737.1 | mRNA | downstream | 194771 | 18858177 ~ 18893330 (-) | False | ppp4r4 |
| XM_034313736.1 | mRNA | downstream | 194773 | 18858177 ~ 18893328 (-) | True | ppp4r4 |
| XM_034313600.1 | mRNA | downstream | 255166 | 18831306 ~ 18832935 (-) | True | LOC117599718 |
| XM_026948142.2 | mRNA | upstream | 921 | 19089576 ~ 19093407 (-) | False | tmem251 |
| XM_034313488.1 | mRNA | upstream | 921 | 19089576 ~ 19093396 (-) | True | tmem251 |
| XM_034313487.1 | mRNA | upstream | 50431 | 19139086 ~ 19163575 (-) | False | chga |
| XM_034313486.1 | mRNA | upstream | 50431 | 19139086 ~ 19163575 (-) | True | chga |
| XM_026948121.2 | mRNA | upstream | 82362 | 19171017 ~ 19183615 (-) | True | si:dkey-177p2.18 |
| TU353207 | other | downstream | 4636 | 19078004 ~ 19083465 (-) | False | ubr7 |
| XR_003404857.2 | other | downstream | 982108 | 18075362 ~ 18105993 (-) | False | dpf3 |
| TU352481 | other | downstream | 1372857 | 17707286 ~ 17715244 (-) | False | acot20 |
| TU351727 | other | downstream | 2041291 | 17043313 ~ 17046810 (-) | False | ttc32 |
| TU351456 | other | downstream | 2530174 | 16555103 ~ 16557927 (-) | False | G296802 |
| LOC113547697 | other | upstream | 177172 | 19265827 ~ 19267009 (-) | True | LOC113547697 |
| TU353415 | other | upstream | 302344 | 19390999 ~ 19391487 (-) | False | LOC113525604 |
| XR_004580086.1 | other | upstream | 359738 | 19448393 ~ 19451604 (-) | False | LOC113524711 |
| LOC113524722 | other | upstream | 383365 | 19472020 ~ 19473976 (-) | True | LOC113524722 |
| TU353447 | other | upstream | 502304 | 19590959 ~ 19591437 (-) | True | G298475 |
