Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU352816 |
| length | 354 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G297966 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 18549260 ~ 18549613 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU352810 | lncRNA | downstream | 16420 | 18531678 ~ 18532840 (-) | True | G297960 |
| TU352804 | lncRNA | downstream | 38551 | 18510487 ~ 18510709 (-) | True | G297954 |
| XR_004580152.1 | lncRNA | downstream | 123112 | 18371681 ~ 18426148 (-) | True | LOC117599783 |
| TU352747 | lncRNA | downstream | 295698 | 18253362 ~ 18253562 (-) | True | G297900 |
| TU352733 | lncRNA | downstream | 313750 | 18234878 ~ 18235510 (-) | True | G297887 |
| TU352819 | lncRNA | upstream | 11984 | 18561597 ~ 18561834 (-) | True | G297969 |
| TU353141 | lncRNA | upstream | 279921 | 18829534 ~ 18830291 (-) | True | G298243 |
| TU353202 | lncRNA | upstream | 452727 | 19002340 ~ 19066932 (-) | False | G298286 |
| TU353203 | lncRNA | upstream | 452727 | 19002340 ~ 19066932 (-) | True | G298286 |
| TU353231 | lncRNA | upstream | 538488 | 19088101 ~ 19088655 (-) | True | G298309 |
| XM_026948144.2 | mRNA | downstream | 266580 | 18272076 ~ 18282680 (-) | True | dll4 |
| XM_026948099.2 | mRNA | downstream | 296800 | 18250272 ~ 18252460 (-) | True | chac1 |
| XM_026948100.2 | mRNA | downstream | 380165 | 18166379 ~ 18169095 (-) | True | rhov |
| XM_034313660.1 | mRNA | downstream | 418767 | 18116550 ~ 18130493 (-) | True | zfyve1 |
| XM_026948161.2 | mRNA | downstream | 443267 | 18072545 ~ 18105993 (-) | True | dpf3 |
| XM_026948147.2 | mRNA | upstream | 26357 | 18575970 ~ 18580206 (-) | True | vrtn |
| XM_026948150.2 | mRNA | upstream | 56908 | 18606521 ~ 18615280 (-) | True | zbtb1 |
| XM_034313858.1 | mRNA | upstream | 77763 | 18627376 ~ 18633161 (-) | False | si:dkey-1h6.8 |
| XM_034313856.1 | mRNA | upstream | 77763 | 18627376 ~ 18633161 (-) | False | si:dkey-1h6.8 |
| XM_034313857.1 | mRNA | upstream | 77763 | 18627376 ~ 18633161 (-) | True | si:dkey-1h6.8 |
| XR_003404857.2 | other | downstream | 443267 | 18075362 ~ 18105993 (-) | False | dpf3 |
| TU352481 | other | downstream | 834016 | 17707286 ~ 17715244 (-) | False | acot20 |
| TU351727 | other | downstream | 1502450 | 17043313 ~ 17046810 (-) | False | ttc32 |
| TU351456 | other | downstream | 1991333 | 16555103 ~ 16557927 (-) | False | G296802 |
| TU353207 | other | upstream | 528391 | 19078004 ~ 19083465 (-) | False | ubr7 |
| LOC113547697 | other | upstream | 716214 | 19265827 ~ 19267009 (-) | True | LOC113547697 |
| TU353415 | other | upstream | 841386 | 19390999 ~ 19391487 (-) | False | LOC113525604 |
| XR_004580086.1 | other | upstream | 898780 | 19448393 ~ 19451604 (-) | False | LOC113524711 |
| LOC113524722 | other | upstream | 922407 | 19472020 ~ 19473976 (-) | True | LOC113524722 |
