Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnae-cuc_8 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.65 |
| exon number | 1 |
| gene id | trnae-cuc_8 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 12639252 ~ 12639323 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577880.1 | lncRNA | downstream | 9996 | 12628472 ~ 12629256 (-) | True | LOC117596890 |
| XR_004577878.1 | lncRNA | downstream | 10864 | 12627677 ~ 12628388 (-) | True | LOC117596888 |
| XR_004577879.1 | lncRNA | downstream | 11771 | 12627046 ~ 12627481 (-) | True | LOC117596889 |
| TU53462 | lncRNA | downstream | 203769 | 12435274 ~ 12435483 (-) | False | nin |
| TU53441 | lncRNA | downstream | 269903 | 12368513 ~ 12369349 (-) | True | G45249 |
| TU53526 | lncRNA | upstream | 75361 | 12714684 ~ 12717329 (-) | True | G45305 |
| TU53555 | lncRNA | upstream | 80306 | 12719629 ~ 12721353 (-) | True | G45324 |
| TU53554 | lncRNA | upstream | 82278 | 12721601 ~ 12724180 (-) | True | G45323 |
| TU53553 | lncRNA | upstream | 84242 | 12723565 ~ 12724180 (-) | False | G45323 |
| TU53581 | lncRNA | upstream | 135122 | 12774445 ~ 12776116 (-) | True | G45340 |
| XM_026934693.1 | mRNA | downstream | 5834 | 12631213 ~ 12633418 (-) | True | LOC113539135 |
| XM_034301500.1 | mRNA | downstream | 86180 | 12548237 ~ 12553072 (-) | False | LOC113537655 |
| XM_034301503.1 | mRNA | downstream | 86358 | 12548237 ~ 12552894 (-) | False | LOC113537655 |
| XM_034301495.1 | mRNA | downstream | 86845 | 12545878 ~ 12552407 (-) | False | LOC113537655 |
| XM_034301493.1 | mRNA | downstream | 86845 | 12548237 ~ 12552407 (-) | False | LOC113537655 |
| XM_034302874.1 | mRNA | upstream | 5292 | 12644615 ~ 12663466 (-) | True | dtx4b |
| XM_026945490.2 | mRNA | upstream | 35430 | 12674753 ~ 12683749 (-) | True | zgc:66472 |
| XM_034303011.1 | mRNA | upstream | 46976 | 12686299 ~ 12696128 (-) | True | urb2 |
| XM_026943181.2 | mRNA | upstream | 85169 | 12724492 ~ 12732902 (-) | True | rab4a |
| XM_026936811.2 | mRNA | upstream | 112017 | 12751340 ~ 12758155 (-) | True | rhoua |
| TU53537 | other | downstream | 6237 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
| TU53492 | other | downstream | 105177 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | downstream | 105177 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53378 | other | downstream | 486746 | 12144895 ~ 12152506 (-) | False | tmem254 |
| trnag-gcc_1 | other | downstream | 930568 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| trnak-cuu_1 | other | upstream | 207 | 12639530 ~ 12639602 (-) | True | trnak-cuu_1 |
| trnak-cuu_2 | other | upstream | 29170 | 12668493 ~ 12668565 (-) | True | trnak-cuu_2 |
| trnae-cuc_9 | other | upstream | 29497 | 12668820 ~ 12668891 (-) | True | trnae-cuc_9 |
| trnal-cag | other | upstream | 94877 | 12734200 ~ 12734282 (-) | True | trnal-cag |
| XR_004577863.1 | other | upstream | 366163 | 13005486 ~ 13031196 (-) | False | slka |
