Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU455592 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G384280 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 9813007 ~ 9813223 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU455583 | lncRNA | downstream | 16353 | 9795926 ~ 9796654 (-) | True | G384271 |
| TU455572 | lncRNA | downstream | 26908 | 9780583 ~ 9786099 (-) | True | G384260 |
| XR_004577388.1 | lncRNA | downstream | 386738 | 9424980 ~ 9426269 (-) | True | LOC117596221 |
| XR_004577382.1 | lncRNA | downstream | 496402 | 9311773 ~ 9316605 (-) | False | LOC117596217 |
| XR_004577383.1 | lncRNA | downstream | 496402 | 9311773 ~ 9316605 (-) | True | LOC117596217 |
| XR_004577442.1 | lncRNA | upstream | 234749 | 10047972 ~ 10050220 (-) | True | LOC117596261 |
| XR_003403245.2 | lncRNA | upstream | 355891 | 10169114 ~ 10171595 (-) | True | LOC113531315 |
| TU455919 | lncRNA | upstream | 375590 | 10188813 ~ 10226881 (-) | False | G384561 |
| TU455921 | lncRNA | upstream | 375590 | 10188813 ~ 10226881 (-) | False | G384561 |
| TU455928 | lncRNA | upstream | 375590 | 10188813 ~ 10226881 (-) | False | G384561 |
| XM_026921530.2 | mRNA | downstream | 44972 | 9765740 ~ 9768035 (-) | True | ier5l |
| XM_026921889.2 | mRNA | downstream | 70116 | 9729735 ~ 9742891 (-) | True | crata |
| XM_026921643.2 | mRNA | downstream | 84392 | 9707216 ~ 9728615 (-) | False | fkbp15a |
| XM_026921642.2 | mRNA | downstream | 84392 | 9707216 ~ 9728615 (-) | True | fkbp15a |
| XM_026922538.2 | mRNA | downstream | 125317 | 9682276 ~ 9687690 (-) | True | rpl12 |
| XM_026921532.2 | mRNA | upstream | 175554 | 9988777 ~ 10004503 (-) | True | ndor1 |
| XM_034300630.1 | mRNA | upstream | 333816 | 10147039 ~ 10163600 (-) | True | c9 |
| XM_026922423.2 | mRNA | upstream | 333816 | 10147039 ~ 10162698 (-) | False | c9 |
| XM_026922014.2 | mRNA | upstream | 450699 | 10263922 ~ 10266746 (-) | True | m17 |
| XM_026922337.2 | mRNA | upstream | 535799 | 10349022 ~ 10357098 (-) | True | zmat5 |
| XR_003403283.1 | other | downstream | 128234 | 9684647 ~ 9684773 (-) | True | LOC113531681 |
| XR_003403281.1 | other | downstream | 128609 | 9684272 ~ 9684398 (-) | True | LOC113531679 |
| XR_003403284.2 | other | downstream | 129902 | 9682981 ~ 9683105 (-) | True | LOC113531682 |
| XR_003403282.1 | other | downstream | 130274 | 9682607 ~ 9682733 (-) | True | LOC113531680 |
| XR_004577368.1 | other | downstream | 557832 | 9240716 ~ 9255175 (-) | False | LOC113531664 |
| TU456221 | other | upstream | 792767 | 10605990 ~ 10606272 (-) | True | G384811 |
| TU456386 | other | upstream | 1265489 | 11078712 ~ 11083941 (-) | True | G384960 |
| XR_004577405.1 | other | upstream | 1808439 | 11621662 ~ 11627582 (-) | False | map1b |
| XR_004577404.1 | other | upstream | 1808439 | 11621662 ~ 11627522 (-) | False | map1b |
| XR_003403212.2 | other | upstream | 1878011 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
