Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU456074 |
| length | 230 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G384666 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 10523236 ~ 10523465 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU456062 | lncRNA | downstream | 22176 | 10500821 ~ 10501060 (-) | True | G384654 |
| TU456051 | lncRNA | downstream | 143533 | 10378212 ~ 10379703 (-) | True | G384643 |
| TU456043 | lncRNA | downstream | 161104 | 10361909 ~ 10362132 (-) | True | G384639 |
| TU456026 | lncRNA | downstream | 177366 | 10345522 ~ 10345870 (-) | True | G384627 |
| TU455937 | lncRNA | downstream | 274379 | 10211954 ~ 10248857 (-) | False | G384561 |
| TU456076 | lncRNA | upstream | 13742 | 10537207 ~ 10537663 (-) | True | G384668 |
| TU456079 | lncRNA | upstream | 15533 | 10538998 ~ 10539209 (-) | True | G384671 |
| TU456192 | lncRNA | upstream | 39579 | 10563044 ~ 10563380 (-) | True | G384782 |
| TU456194 | lncRNA | upstream | 42347 | 10565812 ~ 10566019 (-) | True | G384784 |
| TU456202 | lncRNA | upstream | 53551 | 10577016 ~ 10577232 (-) | True | G384792 |
| XM_034300812.1 | mRNA | downstream | 11526 | 10507836 ~ 10511710 (-) | False | ungb |
| XM_026922417.2 | mRNA | downstream | 11526 | 10507836 ~ 10511710 (-) | True | ungb |
| XM_026921938.2 | mRNA | downstream | 44512 | 10460316 ~ 10478724 (-) | True | ppp6c |
| XM_034300836.1 | mRNA | downstream | 44517 | 10460316 ~ 10478719 (-) | False | ppp6c |
| XM_026921919.2 | mRNA | downstream | 82843 | 10387883 ~ 10440393 (-) | False | scai |
| XM_026921990.2 | mRNA | upstream | 34771 | 10558236 ~ 10667122 (-) | True | ssh1b |
| XM_026921991.2 | mRNA | upstream | 34771 | 10558236 ~ 10666857 (-) | False | ssh1b |
| XM_026921992.2 | mRNA | upstream | 36100 | 10559565 ~ 10667122 (-) | False | ssh1b |
| XM_034300713.1 | mRNA | upstream | 167779 | 10691244 ~ 10765111 (-) | False | coro1cb |
| XM_026922022.2 | mRNA | upstream | 167779 | 10691244 ~ 10765111 (-) | True | coro1cb |
| XR_003403283.1 | other | downstream | 838463 | 9684647 ~ 9684773 (-) | True | LOC113531681 |
| XR_003403281.1 | other | downstream | 838838 | 9684272 ~ 9684398 (-) | True | LOC113531679 |
| XR_003403284.2 | other | downstream | 840131 | 9682981 ~ 9683105 (-) | True | LOC113531682 |
| XR_003403282.1 | other | downstream | 840503 | 9682607 ~ 9682733 (-) | True | LOC113531680 |
| XR_004577368.1 | other | downstream | 1268061 | 9240716 ~ 9255175 (-) | False | LOC113531664 |
| TU456221 | other | upstream | 82525 | 10605990 ~ 10606272 (-) | True | G384811 |
| TU456386 | other | upstream | 555247 | 11078712 ~ 11083941 (-) | True | G384960 |
| XR_004577405.1 | other | upstream | 1098197 | 11621662 ~ 11627582 (-) | False | map1b |
| XR_004577404.1 | other | upstream | 1098197 | 11621662 ~ 11627522 (-) | False | map1b |
| XR_003403212.2 | other | upstream | 1167769 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
