Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU484793 |
| length | 334 |
| lncRNA type | intronic |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G408376 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047624.1 |
| NCBI id | CM018570.1 |
| chromosome length | 11744058 |
| location | 5401931 ~ 5402285 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU484786 | lncRNA | upstream | 23997 | 5376056 ~ 5377934 (+) | True | G408369 |
| TU484780 | lncRNA | upstream | 26863 | 5356138 ~ 5375068 (+) | True | G408364 |
| TU484774 | lncRNA | upstream | 57869 | 5343505 ~ 5344062 (+) | False | map3k7 |
| XR_004577678.1 | lncRNA | upstream | 158256 | 5223681 ~ 5243675 (+) | True | LOC113529394 |
| XR_003403047.2 | lncRNA | upstream | 158256 | 5229869 ~ 5243675 (+) | False | LOC113529394 |
| TU484795 | lncRNA | downstream | 1182 | 5403467 ~ 5406051 (+) | True | G408378 |
| TU484955 | lncRNA | downstream | 203086 | 5605371 ~ 5605584 (+) | True | G408531 |
| TU485168 | lncRNA | downstream | 487228 | 5889513 ~ 5889799 (+) | True | G408711 |
| TU485271 | lncRNA | downstream | 646281 | 6048566 ~ 6066515 (+) | True | G408805 |
| TU485288 | lncRNA | downstream | 665644 | 6067929 ~ 6068392 (+) | True | G408821 |
| XM_026917981.2 | mRNA | upstream | 57881 | 5322646 ~ 5344050 (+) | True | map3k7 |
| XM_026917982.2 | mRNA | upstream | 57881 | 5322648 ~ 5344050 (+) | False | map3k7 |
| XM_034302114.1 | mRNA | upstream | 386857 | 4938498 ~ 5015074 (+) | False | epha7 |
| XM_026918327.2 | mRNA | downstream | 94882 | 5497167 ~ 5546607 (+) | True | mdn1 |
| XM_026917866.2 | mRNA | downstream | 146338 | 5548623 ~ 5557518 (+) | True | katna1 |
| XM_034301888.1 | mRNA | downstream | 187572 | 5589857 ~ 5603470 (+) | True | LOC113529080 |
| XM_026917736.2 | mRNA | downstream | 281791 | 5684076 ~ 5694444 (+) | True | lrp11 |
| XM_026917556.2 | mRNA | downstream | 311171 | 5713456 ~ 5719651 (+) | True | nup43 |
| XR_004577669.1 | other | upstream | 742236 | 4655964 ~ 4659695 (+) | True | LOC113529331 |
| XR_003403042.2 | other | upstream | 742236 | 4655964 ~ 4659695 (+) | False | LOC113529331 |
| TU483755 | other | upstream | 1520309 | 3876675 ~ 3881622 (+) | False | LOC117596542 |
| XR_004577677.1 | other | upstream | 1651740 | 3672852 ~ 3750191 (+) | False | tab2 |
| TU485026 | other | downstream | 331510 | 5733795 ~ 5736261 (+) | False | lyrm2 |
| trnag-gcc_30 | other | downstream | 340507 | 5742792 ~ 5742862 (+) | True | trnag-gcc_30 |
| XR_004577658.1 | other | downstream | 869747 | 6272032 ~ 6276665 (+) | True | LOC117596600 |
| TU485379 | other | downstream | 1080816 | 6483101 ~ 6795220 (+) | True | G408893 |
| TU485443 | other | downstream | 1154078 | 6556363 ~ 6563776 (+) | True | G408929 |
