Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000120 |
| length | 1050 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 3 |
| gene id | AMCG00000120 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 4756984 ~ 4760814 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007601 | visual perception | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU186462 | lncRNA | upstream | 174433 | 4582311 ~ 4582551 (+) | True | G148200 |
| TU186374 | lncRNA | upstream | 563951 | 4116753 ~ 4193033 (+) | False | AMCG00000113 |
| TU186391 | lncRNA | upstream | 581268 | 4173437 ~ 4175716 (+) | True | G148146 |
| TU186388 | lncRNA | upstream | 594673 | 4160855 ~ 4162311 (+) | True | G148143 |
| TU186372 | lncRNA | upstream | 636870 | 4116753 ~ 4120114 (+) | True | AMCG00000113 |
| TU186651 | lncRNA | downstream | 327625 | 5088439 ~ 5161195 (+) | False | AMCG00000136 |
| TU186654 | lncRNA | downstream | 371795 | 5132609 ~ 5159533 (+) | False | AMCG00000136 |
| TU186722 | lncRNA | downstream | 552064 | 5312878 ~ 5314953 (+) | False | AMCG00000145 |
| TU186736 | lncRNA | downstream | 578932 | 5339746 ~ 5340548 (+) | False | AMCG00000146 |
| TU186749 | lncRNA | downstream | 593137 | 5353951 ~ 5354185 (+) | True | G148396 |
| AMCG00000121 | mRNA | upstream | 51058 | 4685589 ~ 4705926 (+) | True | AMCG00000121 |
| AMCG00000110 | mRNA | upstream | 402737 | 4324509 ~ 4354247 (+) | True | AMCG00000110 |
| AMCG00000111 | mRNA | upstream | 476719 | 4243648 ~ 4280265 (+) | True | AMCG00000111 |
| AMCG00000112 | mRNA | upstream | 531902 | 4191834 ~ 4225082 (+) | True | AMCG00000112 |
| AMCG00000114 | mRNA | upstream | 621574 | 4131629 ~ 4135410 (+) | True | AMCG00000114 |
| AMCG00000128 | mRNA | downstream | 35555 | 4796369 ~ 4803426 (+) | True | AMCG00000128 |
| AMCG00000126 | mRNA | downstream | 46354 | 4807168 ~ 4809507 (+) | True | AMCG00000126 |
| AMCG00000127 | mRNA | downstream | 76771 | 4837585 ~ 4843986 (+) | True | AMCG00000127 |
| AMCG00000132 | mRNA | downstream | 112486 | 4873300 ~ 4892210 (+) | True | AMCG00000132 |
| AMCG00000133 | mRNA | downstream | 170921 | 4931735 ~ 4934196 (+) | True | AMCG00000133 |
| TU186262 | other | upstream | 996360 | 3760179 ~ 3760624 (+) | True | G148040 |
| TU186257 | other | upstream | 1032668 | 3720985 ~ 3724316 (+) | True | AMCG00000093 |
| TU186234 | other | upstream | 1061182 | 3693109 ~ 3695802 (+) | False | AMCG00000094 |
| TU185878 | other | upstream | 2353012 | 2403730 ~ 2403972 (+) | True | G147726 |
| TU185496 | other | upstream | 3640034 | 1063085 ~ 1116950 (+) | True | G147416 |
| TU186772 | other | downstream | 674344 | 5435158 ~ 5435762 (+) | False | AMCG00000142 |
| TU186901 | other | downstream | 1120209 | 5881023 ~ 5888027 (+) | True | AMCG00000166 |
| TU187068 | other | downstream | 1710617 | 6471431 ~ 6474232 (+) | True | AMCG00000201 |
| TU187079 | other | downstream | 1755693 | 6516507 ~ 6520822 (+) | False | AMCG00000198 |
| TU187266 | other | downstream | 2529852 | 7290666 ~ 7296664 (+) | False | AMCG00000216 |
