Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002205 |
| length | 1002 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 2 |
| gene id | AMCG00002205 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 7156487 ~ 7157849 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| GO:0005248 | voltage-gated sodium channel activity | molecular_function |
| GO:0005272 | sodium channel activity | molecular_function |
| GO:0015081 | sodium ion transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152324 | lncRNA | upstream | 358444 | 6792976 ~ 6798043 (+) | True | G121526 |
| TU152177 | lncRNA | upstream | 829006 | 6327197 ~ 6327481 (+) | True | G121417 |
| TU152159 | lncRNA | upstream | 878587 | 6277518 ~ 6277900 (+) | True | G121402 |
| TU151928 | lncRNA | upstream | 1586240 | 5474136 ~ 5570247 (+) | True | G121228 |
| TU151892 | lncRNA | upstream | 1880564 | 5243709 ~ 5275923 (+) | True | G121198 |
| TU152516 | lncRNA | downstream | 403217 | 7561066 ~ 7562732 (+) | True | G121680 |
| TU152524 | lncRNA | downstream | 488869 | 7646718 ~ 7648316 (+) | True | G121688 |
| TU152562 | lncRNA | downstream | 671958 | 7829807 ~ 7834211 (+) | True | G121722 |
| TU152587 | lncRNA | downstream | 752709 | 7910558 ~ 7917243 (+) | True | G121741 |
| TU152632 | lncRNA | downstream | 787516 | 7945365 ~ 7953624 (+) | True | G121767 |
| AMCG00002207 | mRNA | upstream | 3166 | 7152473 ~ 7153321 (+) | True | AMCG00002207 |
| AMCG00002204 | mRNA | upstream | 6074 | 7145725 ~ 7150413 (+) | True | AMCG00002204 |
| AMCG00002203 | mRNA | upstream | 28027 | 7120579 ~ 7128460 (+) | True | AMCG00002203 |
| AMCG00002202 | mRNA | upstream | 37301 | 7110777 ~ 7119186 (+) | True | AMCG00002202 |
| AMCG00002195 | mRNA | upstream | 370513 | 6773923 ~ 6785974 (+) | True | AMCG00002195 |
| AMCG00002206 | mRNA | downstream | 1783 | 7159632 ~ 7166827 (+) | True | AMCG00002206 |
| AMCG00002211 | mRNA | downstream | 20590 | 7178439 ~ 7191115 (+) | True | AMCG00002211 |
| AMCG00002214 | mRNA | downstream | 161126 | 7318975 ~ 7323901 (+) | True | AMCG00002214 |
| AMCG00002213 | mRNA | downstream | 168141 | 7325990 ~ 7378440 (+) | True | AMCG00002213 |
| AMCG00002216 | mRNA | downstream | 224689 | 7382538 ~ 7390651 (+) | True | AMCG00002216 |
| TU152254 | other | upstream | 553879 | 6586654 ~ 6602608 (+) | False | AMCG00002190 |
| TU152257 | other | upstream | 553879 | 6586654 ~ 6602608 (+) | True | AMCG00002190 |
| TU151873 | other | upstream | 1932989 | 5218830 ~ 5223498 (+) | True | AMCG00002152 |
| TU151430 | other | upstream | 3616933 | 3537619 ~ 3539554 (+) | False | AMCG00002098 |
| TU151426 | other | upstream | 3620059 | 3533814 ~ 3536428 (+) | False | AMCG00002098 |
| TU152502 | other | downstream | 235951 | 7393800 ~ 7396561 (+) | False | AMCG00002215 |
| TU152752 | other | downstream | 1595877 | 8753726 ~ 8762079 (+) | False | AMCG00002245 |
| TU153130 | other | downstream | 2686431 | 9844280 ~ 9851306 (+) | False | AMCG00002272 |
| TU153133 | other | downstream | 2686431 | 9844280 ~ 9849012 (+) | False | AMCG00002272 |
| TU153306 | other | downstream | 3410063 | 10567912 ~ 10594304 (+) | False | AMCG00002294 |
