Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002217 |
| length | 1432 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 3 |
| gene id | AMCG00002217 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 7658258 ~ 7663689 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0008094 | DNA-dependent ATPase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152524 | lncRNA | upstream | 9942 | 7646718 ~ 7648316 (+) | True | G121688 |
| TU152516 | lncRNA | upstream | 95526 | 7561066 ~ 7562732 (+) | True | G121680 |
| TU152324 | lncRNA | upstream | 860215 | 6792976 ~ 6798043 (+) | True | G121526 |
| TU152177 | lncRNA | upstream | 1330777 | 6327197 ~ 6327481 (+) | True | G121417 |
| TU152159 | lncRNA | upstream | 1380358 | 6277518 ~ 6277900 (+) | True | G121402 |
| TU152562 | lncRNA | downstream | 166118 | 7829807 ~ 7834211 (+) | True | G121722 |
| TU152587 | lncRNA | downstream | 246869 | 7910558 ~ 7917243 (+) | True | G121741 |
| TU152632 | lncRNA | downstream | 281676 | 7945365 ~ 7953624 (+) | True | G121767 |
| TU152757 | lncRNA | downstream | 1126612 | 8790301 ~ 8792478 (+) | False | AMCG00002245 |
| TU152769 | lncRNA | downstream | 1152641 | 8816330 ~ 8816553 (+) | True | G121862 |
| AMCG00002215 | mRNA | upstream | 247028 | 7393816 ~ 7411230 (+) | True | AMCG00002215 |
| AMCG00002216 | mRNA | upstream | 267607 | 7382538 ~ 7390651 (+) | True | AMCG00002216 |
| AMCG00002213 | mRNA | upstream | 279818 | 7325990 ~ 7378440 (+) | True | AMCG00002213 |
| AMCG00002214 | mRNA | upstream | 334357 | 7318975 ~ 7323901 (+) | True | AMCG00002214 |
| AMCG00002211 | mRNA | upstream | 467143 | 7178439 ~ 7191115 (+) | True | AMCG00002211 |
| AMCG00002224 | mRNA | downstream | 263901 | 7927590 ~ 7937933 (+) | True | AMCG00002224 |
| AMCG00002232 | mRNA | downstream | 316615 | 7980304 ~ 8010540 (+) | True | AMCG00002232 |
| AMCG00002231 | mRNA | downstream | 353204 | 8016893 ~ 8022378 (+) | True | AMCG00002231 |
| AMCG00002236 | mRNA | downstream | 464508 | 8128197 ~ 8151854 (+) | True | AMCG00002236 |
| AMCG00002235 | mRNA | downstream | 497637 | 8161326 ~ 8178947 (+) | True | AMCG00002235 |
| TU152502 | other | upstream | 261697 | 7393800 ~ 7396561 (+) | False | AMCG00002215 |
| TU152254 | other | upstream | 1055650 | 6586654 ~ 6602608 (+) | False | AMCG00002190 |
| TU152257 | other | upstream | 1055650 | 6586654 ~ 6602608 (+) | True | AMCG00002190 |
| TU151873 | other | upstream | 2434760 | 5218830 ~ 5223498 (+) | True | AMCG00002152 |
| TU151430 | other | upstream | 4118704 | 3537619 ~ 3539554 (+) | False | AMCG00002098 |
| TU152752 | other | downstream | 1090037 | 8753726 ~ 8762079 (+) | False | AMCG00002245 |
| TU153130 | other | downstream | 2180591 | 9844280 ~ 9851306 (+) | False | AMCG00002272 |
| TU153133 | other | downstream | 2180591 | 9844280 ~ 9849012 (+) | False | AMCG00002272 |
| TU153306 | other | downstream | 2904223 | 10567912 ~ 10594304 (+) | False | AMCG00002294 |
| TU153483 | other | downstream | 3713251 | 11376940 ~ 11377738 (+) | False | AMCG00002311 |
