Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002622 |
| length | 977 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | AMCG00002622 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 22987545 ~ 22990164 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006464 | cellular protein modification process | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0070773 | protein-N-terminal glutamine amidohydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU156173 | lncRNA | upstream | 74943 | 22859923 ~ 22912679 (+) | True | G124601 |
| TU156156 | lncRNA | upstream | 334680 | 22652726 ~ 22652942 (+) | True | G124590 |
| TU156090 | lncRNA | upstream | 548841 | 22436949 ~ 22438781 (+) | True | G124534 |
| TU156041 | lncRNA | upstream | 649664 | 22333949 ~ 22337958 (+) | True | G124494 |
| TU155942 | lncRNA | upstream | 1176801 | 21805620 ~ 21810821 (+) | True | G124408 |
| TU156237 | lncRNA | downstream | 407 | 22990571 ~ 22991760 (+) | True | G124658 |
| TU156247 | lncRNA | downstream | 11624 | 23001788 ~ 23002232 (+) | True | G124666 |
| TU156248 | lncRNA | downstream | 12827 | 23002991 ~ 23003252 (+) | True | G124667 |
| TU156249 | lncRNA | downstream | 21271 | 23011435 ~ 23012000 (+) | True | G124668 |
| TU156273 | lncRNA | downstream | 228166 | 23218330 ~ 23276775 (+) | True | G124687 |
| AMCG00002613 | mRNA | upstream | 35794 | 22947203 ~ 22951828 (+) | True | AMCG00002613 |
| AMCG00002612 | mRNA | upstream | 41701 | 22927289 ~ 22945921 (+) | True | AMCG00002612 |
| AMCG00002618 | mRNA | upstream | 81110 | 22904029 ~ 22906512 (+) | True | AMCG00002618 |
| AMCG00002609 | mRNA | upstream | 391334 | 22564822 ~ 22596288 (+) | True | AMCG00002609 |
| AMCG00002607 | mRNA | upstream | 439482 | 22484287 ~ 22548140 (+) | True | AMCG00002607 |
| AMCG00002621 | mRNA | downstream | 6709 | 22996873 ~ 22999485 (+) | True | AMCG00002621 |
| AMCG00002619 | mRNA | downstream | 38472 | 23028636 ~ 23033585 (+) | True | AMCG00002619 |
| AMCG00002624 | mRNA | downstream | 53660 | 23043824 ~ 23055716 (+) | True | AMCG00002624 |
| AMCG00002620 | mRNA | downstream | 66618 | 23056782 ~ 23067800 (+) | True | AMCG00002620 |
| AMCG00002623 | mRNA | downstream | 78469 | 23068633 ~ 23073698 (+) | False | AMCG00002623 |
| TU155679 | other | upstream | 2711367 | 20274089 ~ 20276255 (+) | True | AMCG00002573 |
| TU155541 | other | upstream | 3855264 | 19130403 ~ 19132358 (+) | False | AMCG00002561 |
| TU155458 | other | upstream | 4149091 | 18832014 ~ 18838531 (+) | True | G123989 |
| TU155222 | other | upstream | 5002892 | 17915436 ~ 17984730 (+) | True | G123807 |
| TU154987 | other | upstream | 6027540 | 16958161 ~ 16960082 (+) | True | AMCG00002500 |
| TU156269 | other | downstream | 77960 | 23068124 ~ 23180043 (+) | True | AMCG00002623 |
| TU156281 | other | downstream | 162484 | 23152648 ~ 23290535 (+) | True | G124689 |
| TU156391 | other | downstream | 687771 | 23677935 ~ 23681385 (+) | True | G124769 |
| TU156498 | other | downstream | 1432088 | 24422252 ~ 24422613 (+) | True | G124863 |
| TU156924 | other | downstream | 3285427 | 26275591 ~ 26278973 (+) | False | AMCG00002684 |
